Polyodon spathula (Mississippi paddlefish): 121296559
Help
Entry
121296559 CDS
T07273
Name
(RefSeq) (E3-independent) E2 ubiquitin-conjugating enzyme UBE2O-like
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121296559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121296559
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
121296559
Ubiquitin system [BR:
pspa04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
121296559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
SH3-A_UBE2O
SH3-B_UBE2O
SH3-C_UBE2O
UQ_con
Tlp
Microtub_bind
Motif
Other DBs
NCBI-GeneID:
121296559
NCBI-ProteinID:
XP_041078193
LinkDB
All DBs
Position
21:complement(30204095..30222745)
Genome browser
AA seq
1276 aa
AA seq
DB search
MAESLPEAAASTPAPSPAPSPGSEPPSSSLPPSLSPLTPSGAGSQRLLFSHDLVSGRYRG
SVRFGLVRLIHGEEDSDTDSDSDTGGGGGGGGGGGGGGGGGGGGGGGGGSSDTESGRADS
RARLLGRGYVRVQWYPEGGKQDVQETKLKLEDRSVVPRDMVRRMGPSESQCGTVVDINIK
CAVKLVGTNCVLYPVNSRDLQHIWPFMYGDYIAYDSWLGKVYDLKNHIILKLSNGARCSM
NTEDGSKLYDVCPHVSDSGLFFDDSYGFYPGQVLIGPSKVFSSVQWLSGVKPVLSKKSKF
RVVVEEVQVVELKVTWITKSFCPGGAESVFPPASVITQENLSRVKHLGYYDHAQWLLGER
CLYVFPAKGDVTQVTCEGPEGTTILPDGSVAKKVKRLLKKEIGKKTTSMADSRASGGQPA
EDTESPEKPEEGDGKLGDDQVNGVTQPGCTNNGPVPGELRQAAPDLWVQSVEQDADDEGA
EDTDDTSSVTSSASSTASSQSGRRKSIPLSIRNLKRKHKKKNKKISRDLKPGDRVAVEVV
STETSADVMWQDGTLETDIRSNELLPIHHLDNNEFCPGDFVVDKRSQAPQDPGMYGVIQS
GDHKGRTCSVKWVKLKPSGDDVEVIGEEEDVSVYDIADHPDFHFRTTDIVIRIGNAEEAL
AADRENEPSVGQVARVDVSSKVEVVWADNSRTIVLPQHLYNVESEIEESDYDSVEGSSSG
ASSEEWEDESDSWETDNGVTEEDHPGESAPAPTPTAPPEEELQGAVGAAAAAIAGKLPKE
GTPRVFKELKEAIKILESLKNMTVEQLLTGSPTSPTVEPEKQTKEKRFLDDIKKLQENLK
KTLDNVAIVEEEKMEAVAEMEEKEEKSQEPQTPVRSEWPSDTPVLCQPSGGKPGVTFTSA
KGEVFSVLEWAPDSHAFKKMEFQPAEAKKFFSTVRKEMALLATSLPDGIMVKTFESRMDL
FAALIKGPTRTPYEGGVFLFDIQLPNIYPAVPPLFRYLSQCSGRLNPNLYDNGKVCVSLL
GTWIGKGTERWTSKSSLLQVLISIQGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMA
LIKMVQSMTQLLQRPVEVFQQEIREHFSASGWRLVHRIETWLELNELAERSLGHRECSRT
PEPGDELSAPAACSEAKEEELEDSGLGACTTSPQETSQHLDSEGAGPARAAEGGAAAAGP
GELRMSQDSAGGQPSVKPKKRRKSYRSFLPEKRGYPDIGFPLFPLSKGFIKSISGVLQHY
RAALAAAGIPERREDK
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatcccttccagaggcagcagcatccaccccggcgccttctccggcccccagc
ccgggctctgaacccccgtcctcttcgcttcccccctccctgtccccgcttaccccgtct
ggggccggttctcagcgcctgctcttctcacacgacctggtctccgggcggtaccgcggg
tcggtccggttcggcctggtgagattgatccatggcgaggaggattcggacacagattcg
gactcagacaccggcggtggaggcggaggaggaggaggaggaggaggaggaggaggaggc
ggcggcggcggcggcggcggcggcggtagctcagacacagagagcggccgggcggactct
cgggctcggcttcttggaagaggttacgtgagggtgcagtggtacccggagggaggcaaa
caggacgtccaggaaaccaagctaaaattagaagatcgctcagttgtgcctcgagacatg
gtgcgacgcatgggccccagcgaaagccaatgtggaacggtagtggacatcaacattaaa
tgtgccgtgaagctcgtggggactaactgtgttctgtacccagtgaacagcagagatctg
cagcacatctggccattcatgtatggtgactacatagcctacgattcgtggctcggaaaa
gtatatgacttgaagaatcatattattctgaagctatcaaatggagccaggtgctcaatg
aacacagaagacgggtcgaaactctatgatgtctgtccccacgtcagtgactcgggtctt
ttcttcgacgactcgtatgggttttatcctggccaggtgctgatcggcccctccaaggtg
ttctccagcgtgcagtggctgtccggcgtcaagccagtcctcagtaagaagagcaagttc
agggtggtggttgaggaggtgcaggtggtggagctgaaggtcacatggattacaaagagt
ttctgtccagggggagctgagagcgtgtttcctccagcctcagtcatcacccaggaaaac
ctgtccagggtaaagcatttgggctactatgaccatgctcagtggctgctgggagagaga
tgcctgtacgtcttcccagctaaaggagatgtgacccaggtaacctgtgaagggccggag
gggactactatcttaccggacggctcggtggccaaaaaggtaaagagactgctgaagaaa
gagattgggaagaagactacaagcatggcggacagtcgggcctcagggggccagcctgca
gaagatacggaaagcccagagaaacctgaagaaggggatgggaagctcggagatgatcag
gtgaacggagtgacccagccgggctgcaccaacaacgggccggtgccgggggagttgagg
caggctgccccggacctgtgggtccagtcggtggagcaggacgcggatgatgagggcgcg
gaggacacagatgacacgagctcggtcacctcatccgcgagctccacggcttcctcccag
agcggccgcaggaagagcatccccctctccatccgcaacctcaagaggaaacacaagaag
aagaacaagaagatttcccgcgatctgaaaccgggggacagggtcgcagtggaggtcgtt
tcaacagagacatccgcagatgtgatgtggcaggacggaacgctggagacagatatcaga
tccaacgagctgttacccatccatcatctggacaacaacgagttctgcccgggggatttt
gttgttgataagcgctctcaagcacctcaagacccaggcatgtatggggtgatccagtct
ggtgatcacaaaggtcgaacctgctctgtgaagtgggttaaactgaagccaagcggtgat
gatgttgaggtaatcggagaagaggaggatgtcagtgtgtatgacattgcagaccaccct
gattttcatttccgaaccactgacattgtcatcaggatagggaatgcagaggaggctctg
gctgctgaccgggagaatgagccctcggtgggacaggtggcacgcgtcgatgtcagcagc
aaagtagaggtggtgtgggcagataattccaggaccattgtactgccgcagcacctgtac
aacgtggagtctgagatcgaagaatcggactacgactctgtggaaggaagcagcagtgga
gcctcttcggaggagtgggaggatgagagcgacagctgggagactgacaacggggtgacc
gaggaggaccacccaggtgagtccgccccggcccccactcccaccgcaccccccgaggag
gagctgcagggtgctgtgggagcggccgcggctgccattgcagggaagctgcccaaagag
ggcacccccagggtctttaaggagctgaaggaggccatcaagatcctggagagcttgaag
aacatgacggtggagcagctgctgaccggctcgcccacctcccccaccgtggagcccgag
aagcagaccaaggagaagaggttcctggacgacatcaagaaactgcaggagaacctgaag
aagacactggacaacgtggccattgtggaggaggagaaaatggaggccgtggccgagatg
gaggaaaaggaggagaagagccaggagccccagacccccgtccgctccgagtggcccagc
gacacccccgtgctctgccagccaagcggggggaagccgggggtcactttcaccagcgcc
aagggagaggtcttctcagtgctggaatgggctccagatagtcacgcttttaagaaaatg
gaattccagccagcagaggctaagaaattctttagcacagtgagaaaggagatggcactc
ctagcaacatctcttcccgacggcatcatggtcaaaacttttgaaagcagaatggacctc
tttgcagcgctgattaaagggccgacgcgcaccccgtacgagggtggggtattcctgttt
gatatccagctgccaaacatctaccctgcagtccctccactgtttcggtacctgtcccag
tgcagcggccggctcaaccccaacctgtacgacaacggcaaggtgtgcgtcagcctgctg
ggcacctggatcgggaagggaacggagagatggacgagcaaatccagcctccttcaagtg
ctgatctctatacaagggctgatcctggtcaatgagccgtactacaacgaggctggcttc
gatagcgacaggggtctgcaggagggctacgagaacagccgctgctacaacgagatggcc
ctgatcaagatggtccagtccatgacccagctgctgcagaggccggtggaggtcttccag
caggagatcagagagcacttctccgccagtggttggcggctggtgcaccgcatcgagacc
tggctggagctcaacgagctggccgagcggagcctaggccacagggagtgcagcaggacc
ccggagcccggggacgagctctctgcacccgctgcctgctcagaggccaaggaagaggag
ctggaggactccggcctgggagcctgtaccacctccccccaggagaccagccagcatttg
gactcggagggtgccggcccggccagggcagcggagggtggggctgcagcggcaggaccg
ggggagctgaggatgtcccaggactctgcagggggccagcccagcgtcaaaccaaagaag
aggagaaagagctaccggagcttcctgccggagaagcgaggatatccagacatcggcttc
cctctcttcccactctccaaaggatttattaagagcatcagcggggtcctgcagcactac
cgtgctgccttggctgctgctgggataccagagaggagagaagacaaataa
DBGET
integrated database retrieval system
