Polyodon spathula (Mississippi paddlefish): 121296579
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Entry
121296579 CDS
T07273
Name
(RefSeq) tubulin beta-3 chain
KO
K07375
tubulin beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04145
Phagosome
pspa04517
IgSF CAM signaling
pspa04540
Gap junction
pspa04814
Motor proteins
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121296579
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121296579
09144 Cellular community - eukaryotes
04540 Gap junction
121296579
09142 Cell motility
04814 Motor proteins
121296579
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121296579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121296579
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121296579
04147 Exosome [BR:
pspa04147
]
121296579
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121296579
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121296579
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121296579
Exosomal proteins of colorectal cancer cells
121296579
Exosomal proteins of bladder cancer cells
121296579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
121296579
NCBI-ProteinID:
XP_041078222
LinkDB
All DBs
Position
21:complement(9556364..9564718)
Genome browser
AA seq
448 aa
AA seq
DB search
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGNYIGDSDLQLERISVYYNEASSHKYV
PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRG
LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEMYEDDDEESEAQK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaattgttcacattcaggctggccaatgtggcaatcagattggagctaagttc
tgggaggtgatcagtgatgaacacggaatcgaccccactggaaactacattggagactcg
gaccttcagctggagagaatcagtgtctattacaatgaggcctcatctcacaaatatgta
cctagagccatcctggttgatctggagcctggaaccatggacagtgtccgctcaggggcc
tttggtcacctcttcagaccagacaacttcatctttggccaaagtggagcaggaaacaat
tgggccaagggccactacacagaaggcgctgagctggtggactcagtcttggatgtggtg
aggaaggagtgtgagaactgtgactgtctgcaaggcttccagctcacccactctctggga
gggggcactggctctgggatgggaacactcctgatcagcaaagtgcgagaggagtaccct
gaccgcatcatgaacactttcagcgtagtgccttcccccaaggtgtcagacacggtggtg
gagccatacaacgccaccctgtccatccaccaactcgtagagaacacagacgagacctac
tgcattgacaacgaagccctctacgacatctgctttaggaccctgaagctagccaccccc
acgtatggagacttaaaccacctggtgtctgccaccatgagcggtgtgaccacttccctg
aggttccctggacagttgaacgctgatctccgcaagctggcggtcaacatggtacccttc
cctcgtctgcatttcttcatgcccggctttgcccctctgaccgcccgtggaagccagcag
taccgcgccctcactgtgccagagctcacccagcagatgtttgatgccaagaacatgatg
gcagcctgcgacccacgccacggacgctacttgacggtagctactgtcttccgtggccgc
atgtccatgaaggaggtggacgagcagatgctggctatccagaacaagaacagcagctat
tttgtggaatggatccccaacaatgtcaaggtggccgtctgcgacatcccaccaagaggg
ctcaagatgtcttccacttttatcggcaacagcacggccatccaggagctgttcaagcgt
atctccgagcagttcacagctatgttcagacgcaaggctttcctgcattggtacaccgga
gagggcatggatgagatggagttcactgaggccgagagcaacatgaacgacctggtttct
gagtaccagcagtaccaggatgccaccgccgaagaggaaggtgaaatgtatgaagatgat
gatgaagagtccgaagcccaaaaatga
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