Polyodon spathula (Mississippi paddlefish): 121296594
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Entry
121296594 CDS
T07273
Name
(RefSeq) iroquois-class homeodomain protein IRX-5-like isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121296594
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121296594
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
121296594
NCBI-ProteinID:
XP_041078243
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All DBs
Position
21:1517765..1529777
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AA seq
457 aa
AA seq
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MSYPQGYLYQPAASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSAAFANPSPG
YNSHLQYTADQAAAATFTSYVGSPYDHTTGMAGSMGYHPYAPLGSYPYGDPAYRKNATRD
ATATLKAWLGEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRN
RSEDEEEEETIDLEKNDDDEPHKPIEKVDSSTDTETGGDPKMNSEDIACDRFKEELNDKE
TGPVLSNSELKDHEERIDILPDSPKATTSSPPTVPRHGPEIIVQENRTETLPSSIAASNT
VNTVNGNAASVIHSPPTAPKPKLWSLAEIATSSDKSKESNESSHPSGPGQCSIIAGRALS
PSRSPSHQCPYPNSAVLSRPIYYTSPFYTGYTNYSTFGHLHSHHEANSASTTHFNGLNQA
VLSRAEALVKESKFRSQTQVDLCKDSPYEPKKGMSNI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcctcagggctacttgtaccaacccgccgcttctttggctctgtattcgtgc
ccggcttacagtacgagtgtgatttctggacccaggactgaagaacttggaagatcttct
tcgggatctgcctttgctccgtatgccggatccgccgcgtttgcaaacccttccccaggt
tacaactctcatctccagtacaccgcggaccaggcggcagctgctacctttacttcgtac
gtgggttctccctacgatcacacgacagggatggccggctctatgggataccatccttac
gcacctttgggctcttacccctacggagaccccgcttaccggaaaaatgccaccagagat
gccactgccacgcttaaggcctggctcggcgagcacaggaaaaatccttaccccaccaaa
ggggagaagatcatgctggccatcatcaccaaaatgaccctgacccaagtgtccacctgg
ttcgccaacgccaggaggagactgaaaaaggaaaacaaaatgacctggaccccaaggaac
aggagtgaagacgaggaagaggaggaaactattgacctggagaaaaacgacgacgatgaa
cctcataagcctatagagaaggtcgactcgtccacagacactgagacaggcggagacccg
aagatgaactcggaggacatcgcttgcgacaggtttaaggaagaacttaatgataaagag
actggcccagtgttgtctaattcggaactaaaagaccacgaagaaagaatagacattctc
cccgactcccccaaagcaacaacctcgtcccccccaactgtgcctcgacatggccctgag
atcattgtgcaagaaaaccgaacagaaacgctgccttcctcaatcgcggcgtcaaataca
gtaaacactgtcaacggcaacgccgcgtctgtgattcattcaccgccgactgctcccaaa
cccaaactttggtctcttgctgagatcgccacatcttcggacaagtctaaggaaagtaac
gagtcgtcacatccctcaggcccgggtcaatgcagtataatcgcaggaagagccttgtct
ccttcccggtccccctcgcaccagtgcccttacccgaacagtgctgtcctttcccggcca
atttattacacttctccattttatacagggtacacgaactacagcactttcggacacctc
cacagtcaccacgaagcgaactcggcatctacgacacatttcaatggattaaaccaggct
gtgctgagtagagccgaggctctggtaaaagaatctaaattcagaagccaaacacaggta
gatctttgtaaagactcaccttatgaaccgaagaaaggtatgtcaaacatttaa
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