Polyodon spathula (Mississippi paddlefish): 121296620
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Entry
121296620 CDS
T07273
Name
(RefSeq) calsyntenin-3-like
KO
K22661
calsyntenin 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121296620
Cell adhesion molecules [BR:
pspa04515
]
Cadherins
Cadherin related
121296620
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
121296620
NCBI-ProteinID:
XP_041078290
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Position
21:17656308..17727764
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AA seq
958 aa
AA seq
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MNRLTAVLLLPLLVSSTVLANKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEVCGFRVHGGGGSVPFEAVVLDKLTGEGLIRAKEPLDCESQREHSFTIQAYDCGEG
PEGTNSKKSHKATVHVRVNDVNEFTPVFVEPLYQVSVSESRLYDRILRVEAIDADCSPQF
SQICFYEILTPNMPFTIDNDGNIKNSEVLDFHRQRLYRFSVTAYDCGKKRAAQDSEVQIE
VKPTCKPAWRGWSKRIEYTPGSGSVSLFPSMHLETCEEPVWNIQATVELQTNHIGKGCDR
DSYSDRSVRRLCGAVRGEVDLLPPPSPSTNWTAGLTTVPSPDSSLVFVFNGSERQACEVP
QSALRELGVSAGDHFTLQLWMKHASGTQPAQQQHGRARREEESIICNTVSNDDSFSHYSL
SVHGCRLSLLYWPQLDNARPVKFLWKLEQVCDDDWHHYAVNLEFPTVTLYVDGVTYDPAL
IHDNGLLCPPVPRPRLVIGASWTEEAQKGCTNISESERESAAPRFQSHFRGLLAGFTVRR
GCVEPHSVIECLYACREGLDFGDLESLGSGMKVHVNPTQSMLILEGDDIENFNRAIQQVT
YRNSLRFATPGVRPLRISTSLRCFSEEGCVSIRDVEGYLVVLQPDAPQIFLSGTAHFSRP
AFEFETPQGVPLFSELRITCSLSHSINTASQSMEGGALMSDAVAHTLDGCEVSPVGEELD
LQREELILDPKSVSERGLELINNTAYIAISGVESISVYEDLLRSLRYRISVGAMLYERKF
RLSCTEMNGHYASNEFTVEVNFLHSVDAGQSHPNHLLSSQQFMPPSRHNLPPELAGHNLA
NAHRNSVVPGVATVIIMVCVGFLALMVVLGIFRIRSIHRRETKERICGGKEGEIDWDDSA
LTIIVNPMESYESQHGVSAGAEGEEEGEESPESPPGDSPDDQRIIIKRDGQDHPPRHY
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgactgacagcggtgcttctgctgccgttattggttagcagcaccgtactggcc
aataaagccaataagcacaagccatggattgagacagagtaccaggggatcgtgatggag
aatgacaacactgtgctgctgaacccgccattgttcgccctggacaaggatgcacccctg
cactatgcaggtgaggtgtgtgggttccgggtgcacggtggggggggcagcgtccccttc
gaggccgtggtgctagacaagttgacgggggaggggctgatccgtgcgaaggagccgctg
gactgcgagtctcagagagagcacagcttcaccatccaggcatacgactgtggagaggga
ccagaggggaccaacagcaagaaatcacacaaggccacagtgcacgtgcgagtgaatgat
gtgaacgagttcaccccagtgttcgtggagcccctgtaccaggtgtcggtaagcgagagc
cggctgtatgacaggatcctcagagtggaggccatcgatgcagactgctccccgcagttc
agccagatctgcttctacgagatcctcactcccaacatgcccttcaccatcgacaacgac
ggtaacattaagaactcggaggttcttgatttccatcggcagcggttatatcgcttctcc
gtgacagcgtacgactgcggcaagaagcgtgcagcgcaggacagcgaggtgcagattgag
gtgaaaccgacttgcaaaccagcctggagaggctggtcaaagcgaattgagtacacccct
ggctctggcagtgtctcactctttcccagcatgcacttggagacttgcgaggagccggtt
tggaacatccaggccaccgtagaactgcagaccaaccacatcggcaagggctgtgaccgg
gacagctactccgaccgctctgtgaggcgactctgtggtgcagtgcgcggggaggtggac
cttctcccgcccccttccccctccaccaattggacagcagggctgaccacggtgccctcc
cctgattcgtcactggtgtttgtgttcaatggctcggaacggcaggcgtgcgaggtgccc
cagtccgcgctgcgtgagcttggcgtgtcagccggagaccacttcactttgcagctgtgg
atgaaacacgccagtggcacccagccggcacagcagcaacacggccgggccaggagagaa
gaagagagtatcatctgtaacaccgtcagcaacgatgactcgttttctcactactctctc
tcggtgcatggctgtcgtctgtccctcctgtactggcctcagcttgacaacgccagacct
gtaaagttcctctggaagctggaacaggtgtgtgatgatgactggcaccattacgctgtg
aatctggagttccccacagtcacgctctacgtggacggagtgacctacgaccctgcgctc
atccatgacaacggcctcctttgcccccccgtcccccgcccccgcctcgtcatcggagcc
agctggacagaagaagctcagaagggatgcactaacatcagtgaatctgagcgagaatct
gcagcccctcggttccagtctcattttcggggtctgctggcggggttcactgtgcggcgg
ggttgtgtggagccccacagtgtgatcgagtgtctgtacgcctgccgtgaggggctggac
tttggggacctcgagtcgctggggtcgggcatgaaggtccatgttaatcctacacagtcc
atgttgattcttgaaggcgatgacattgagaatttcaatcgggcgattcagcaggtcacg
tatcggaactctctgaggttcgcgactcctggggtccgtccactaaggatatccacatcg
ctcaggtgtttcagtgaggagggttgtgtttcaattcgtgatgtcgaggggtacctggtg
gtcctgcagccggacgcccctcagatcttcctctctgggacggctcacttctcacgccct
gcctttgaatttgagaccccccagggggtgcccctcttctctgagttgaggattacctgt
tccctgtcccactccatcaacacagccagccagagcatggagggcggagctctcatgtca
gacgcggtggcacacacacttgatggctgtgaggtgtctccagtgggggaggagttggac
ctgcagagggaggagcttattctcgaccccaagtccgtgagcgagagaggactggaactg
atcaataatacggcttacattgcaatatcaggtgtggagtcaatctcagtgtacgaggat
ctcttgcgatcgctgcgttatcggatctctgtcggcgccatgctgtacgagaggaagttc
cggctatcctgcacagagatgaacggacactatgccagcaatgagttcacagtggaggtg
aatttcctgcacagtgttgacgctggtcagtcgcatcccaatcacttgctttcctctcag
cagtttatgcccccctcaagacacaacctgccccccgagcttgcgggacacaacctggcc
aatgcacaccgcaactcagttgttcctggtgttgccacagtcatcatcatggtgtgtgtg
ggcttcttggctctcatggttgttttgggaatattccggattcgctccattcaccgccga
gaaacaaaggaaagaatctgcggagggaaggagggtgagatagactgggacgactcggct
ctcaccatcattgtcaacccaatggagtcctacgagtcacagcacggagtctctgctggg
gctgagggtgaggaggagggagaggagtctccggaatcaccacctggcgattcccccgat
gaccagcgaatcatcatcaagcgcgacggtcaagaccacccccctcggcactactga
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