Polyodon spathula (Mississippi paddlefish): 121296628
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Entry
121296628 CDS
T07273
Name
(RefSeq) RNA-binding protein NOB1-like
KO
K11883
RNA-binding protein NOB1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121296628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121296628
03051 Proteasome [BR:
pspa03051
]
121296628
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
121296628
Proteasome [BR:
pspa03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
121296628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
WRNPLPNID
DUF7129
HypA
DZR_2
Zn_ribbon_15
Cys_rich_KTR
Motif
Other DBs
NCBI-GeneID:
121296628
NCBI-ProteinID:
XP_041078313
LinkDB
All DBs
Position
21:complement(9671236..9677139)
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AA seq
440 aa
AA seq
DB search
MSAALAEHVVADAGAFLKNAPLQDIGKNIYTIKEVVNEIRDKETKKRLAFLPYTLQFKDP
FPEFIQLVTEFSKKTGDYPSLSATDIKVLALTYQLESEHVGINHLKQEPERKVQVSSTRQ
HPEAPVNIAGFHLPSKKHQENAAGICSTQTPESSEFNTFQFWRNPLPSIETDLLELLSAE
LVSVADSSTGVGDHLSRKSHEGDGDSKERSEEEEEEENTGEAGGGGGDDYDDDGGWITPS
NIKQIQQDMGCCETPSKMQVGCLTTDFAMQNVLIQIGLHVLSVSGMLITEARSYILRCHA
CFRTTSNMTKVFCPNCGNKTLKKIAVTIKEDGSFQMHFSRNPKVLNPKGMRYSLPKPQGG
KHANNPHLVEDQHFPQQRLSRKARQKTNVFDPDYTAGGSPFAENDIYSRAANLNIRDSQC
GAGRRRVNPNAANKKFVKKR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggccttggcagagcatgttgttgctgatgctggagctttccttaagaatgca
cctttacaggacattgggaagaacatttataccatcaaagaagttgtgaatgaaatccgt
gataaggaaacaaaaaaaaggcttgcctttttaccatacacgcttcagttcaaggatccc
tttccggagttcattcaattagtgactgaattctccaaaaagacaggtgattaccccagc
ttgtcagctacagacatcaaggttttagccttgacctaccagcttgagtcggaacatgtg
ggcatcaaccatctgaaacaagaaccagaaagaaaagtccaagtgagcagcactagacaa
catccagaggccccagtaaatattgctggatttcatctaccttcaaagaagcaccaagaa
aatgctgctggaatctgttccacacagaccccagagagctcagagttcaacaccttccag
ttctggaggaatccactgcccagcatagaaactgatctattggagttactgagtgctgag
ttggtgtcagtagcagacagctccacaggtgtaggggatcatctttccagaaagagtcat
gaaggggatggggactctaaagaaaggagtgaggaggaggaagaggaggaaaacacaggg
gaggctggtggtggtggtggtgatgattatgatgatgatggaggttggataacccccagc
aatatcaaacagattcaacaggacatggggtgctgtgaaactccttccaaaatgcaagtt
ggctgtctgactacagatttcgccatgcagaatgttctcattcagattgggctccatgta
ctctcggtcagcggaatgttaatcactgaagccaggagttacatcctgcggtgccacgca
tgcttcaggaccacatccaacatgacaaaagtcttctgcccaaactgcgggaataaaacc
ttgaagaaaattgcagtgacgataaaggaggacggcagtttccagatgcacttctcacgc
aaccccaaggtgctgaatcccaaaggaatgcggtactccctcccaaagccccagggtggg
aagcatgctaacaacccccaccttgtggaggaccagcacttcccacagcagcgtctgtcc
cgcaaggcccggcagaagaccaacgtctttgaccccgattacaccgccggggggtctccc
ttcgcagagaacgacatctacagccgggcggctaacctcaacatccgggacagccagtgc
ggggctggccgccgcagggtaaaccccaacgccgccaacaagaaatttgtcaagaaaaga
tga
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