Polyodon spathula (Mississippi paddlefish): 121296636
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Entry
121296636 CDS
T07273
Name
(RefSeq) acidic leucine-rich nuclear phosphoprotein 32 family member B-like
KO
K18647
acidic leucine-rich nuclear phosphoprotein 32 family member B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121296636
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121296636
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121296636
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121296636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_9
LRR_8
LRR_6
LRR_1
LRR_14
LRR_NXF1-5
LRR_Zer-1
LRR_R13L1-DRL21
LRR_At1g61320_AtMIF1
LRR_LRWD1
LRR_EndoS
LRR_At5g56370
LRR_FBXL18
Motif
Other DBs
NCBI-GeneID:
121296636
NCBI-ProteinID:
XP_041078331
LinkDB
All DBs
Position
2:complement(42104045..42125852)
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AA seq
259 aa
AA seq
DB search
MDMKKRIHLELRNRTPSDVRELVLDNCRSNEGKIEGLTAEFVNLEFLSLINVGLISVSNL
PKLSKLKKLELSDNRISGALDVLAEKLPNLTHLNLSGNKLKDISTLEPLKKLDNLKSLDL
FNCEVTNLNDYRESVFKLLPQLTYLDGYDLEDKEASDSDGEVDGVDEDDDEEGEEDEDED
GEDFDEEDDDDDEDEEEVEGEEDDEEVSGEEEEEDGQDGEVDDEDDEEEADEGEEGGKGE
KRKREAEDEDDDEDDEEDD
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaaaaagaggatccacctagaactgagaaacaggacgccgtcagatgtacga
gaactggtcctggacaattgcaggtcgaacgaaggcaaaattgaaggcctaacagcagag
tttgtgaaccttgaattcctcagcttaataaatgttggcttaatctctgtttcaaacctc
ccaaaactctccaaattgaaaaagctggaactcagtgacaacagaatttcgggtgccctt
gatgtgttagcagagaaactcccaaaccttacacatctaaacctcagtggaaacaaactg
aaagacatcagcacgttggaacccttgaaaaagttggacaacctgaagagtctggacctg
tttaactgtgaagtgacgaacttgaatgactaccgggagagtgtcttcaagctcctgccc
cagctcacgtacttggacgggtacgacctggaggacaaagaggcctcggactcggacggg
gaggtcgatggcgtggacgaggatgacgacgaagaaggcgaggaggacgaggatgaggat
ggagaggattttgatgaagaggatgacgatgatgatgaagacgaagaggaagtagaaggg
gaggaggatgatgaggaagtcagtggggaagaggaggaggaagatggacaggatggagag
gttgatgacgaagatgacgaagaggaggcagatgaaggtgaggagggcggtaaaggtgag
aagagaaagagagaggctgaggatgaagacgatgatgaagatgacgaggaggatgattaa
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