Polyodon spathula (Mississippi paddlefish): 121296645
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Entry
121296645 CDS
T07273
Symbol
usb1
Name
(RefSeq) U6 snRNA phosphodiesterase
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121296645 (usb1)
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
121296645 (usb1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HVSL
Motif
Other DBs
NCBI-GeneID:
121296645
NCBI-ProteinID:
XP_041078336
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All DBs
Position
21:10699426..10704488
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AA seq
305 aa
AA seq
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MLVGYSSSSEEENEIIQNGKRKGENHQNDNSSLDNKRCRKEAGCVLKVTRLQSVTDGKKS
PSHAKGEEARPPQQCVPEQRPRLPMPGSVLNMFKETEEEEGFEDRTQYGGRIRSFAHERG
NWATYVYLPYLAEEESLELVDQLISGAGAHGVSLTRMEEFHISLSQTVILRHHWIEPFVL
SLKEGLASGRRFLCVADRLKVYTNQERTRTFLGLEVRAGHAQVLEMVRVIDRTMQEFNLS
TFHQNPSFHISLAWCVGDCSESLRGCCQELQNIVDDFEDSASLLRFSGHEIRCKSGNKFF
SFPLL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgttagttggctacagcagcagctccgaagaagaaaatgaaattatacaaaacggaaag
cgaaaaggtgaaaatcaccaaaatgacaacagctcgctggataataaaagatgcagaaaa
gaagcaggttgtgtattgaaagtcactcggctccagtcagtgacagacggcaaaaagtcc
cccagccatgcgaagggagaggaagcaaggccaccccagcagtgtgtcccagagcaacga
ccccgcctgcctatgccaggcagtgtgctgaacatgttcaaggagacagaggaggaagaa
gggtttgaggaccgcacccaatatggaggacggatacgctcctttgcacatgagcgagga
aactgggccacttatgtatacctgccatacctagctgaagaggagtctctggagttggtt
gatcagctgatctcgggagcaggggcccatggtgtctcactaaccagaatggaggagttt
cacatcagcctgtcacaaactgtcattctgcgccatcactggatagaacccttcgtcctg
tcactgaaggagggcctggcctctggcagaaggttcctgtgtgttgcagacagattgaag
gtctacacaaaccaggagagaacccggaccttcttggggctggaggtgagagcaggacat
gctcaggtgctggagatggtccgagtgatcgacaggaccatgcaggagttcaacctgagc
acgtttcaccagaatccgtcattccacatcagcctggcctggtgtgtgggtgactgctct
gagagcctacgagggtgttgtcaagaactgcagaatatagttgatgattttgaagatagt
gcttccctgttgagattttctggacatgaaattcgctgcaagtctgggaataaattcttc
tccttcccactgctctga
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