Polyodon spathula (Mississippi paddlefish): 121296670
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Entry
121296670 CDS
T07273
Name
(RefSeq) FH1/FH2 domain-containing protein 3-like
KO
K23938
FH1/FH2 domain-containing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121296670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121296670
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
121296670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
FH3_FHOD1-3
Formin_GBD_N
Drf_FH3
Stonustoxin_helical
Motif
Other DBs
NCBI-GeneID:
121296670
NCBI-ProteinID:
XP_041078372
LinkDB
All DBs
Position
21:complement(2196408..2246926)
Genome browser
AA seq
1338 aa
AA seq
DB search
MASVVCRVQFLDDMDPFVCTNLPEPRRPPPYTLYEDISLIEQVAGVHKLLGAPLKLEDCA
LQLSPSGNYMDLDLTLSEQKDDLEQFYEDISKGKKPVLILRTKLSVRVHAILEKLFNSHG
PELRRSLFSLKQLFQDDKDLVPEFVISEGLTCLVKVGAEADQNYQNYILRALSQIMLFVD
GMNGVINHSETLQWLYTLTGSMHRLVVKTALKLLIVFVEYTESNAQLLIQAVSTVSRQRD
TKPWSCLIEILEEKNGADLELLVFTMTLINKTLAALPDQDSFYDLTDCLETQGMETVIHR
HMNNKGTDSDLKHQFTLYENALRFEDGELDGALPSVQRDRRKLAPSAEEGRKSRRSSGQN
MTEAAFASTTPSSCASPSPTLESSLPSLNRSHRTPLPSDRASRSQDSGSQSSSPALSPVS
GSPIASSNGIHFPAAELQQSEGPPSTSSSHCPGPFARGRSFISHYVPPLGIGRRSRLSSG
QSVSGEASATSASPAFQDSSPNGSQSDLHCTLPVSEKEGTTSERGIFKLHQTDSAWTEEV
CSVNTDKPVLRKFESRFLQSLAATQKEKDKKRLSLSKGRLDTLSSQEVSSSPDIVVTTPK
GRESPSCFKEDGEHLSAKERQREAASEEEPCSASSSSASSTLEREDKTGDRQAAHNDPGQ
SLLRQSSLEQHSTLSSDRKFMLDMLYSRNKAGALKTPQEAEKVREQEEVQEGEKEEEEEK
EPREGQKPSSKARLASRISDLEPPYKWSEESHQRPEMESMVGSVAPQEDSCRLRSAAASV
VPRGGGGGPDPLSPPLKTEDSAFAKKRKTVKLFWKELKQSESPRKCTFGRGTVWASLDKV
TVDTAKLEHLFESKAKELPTAKKGAEIKKQTVVVLDPKRSNAINIGMTVLPPAHIIKTAV
LNFDEFAINKEGIEKILTMVPTDEEKQMIQEAQLAHPDVPLGTAEQFLQMLSSISGLTAR
LQLWAFKLDYESMEKEIAEPLFDLKLGMEQLAKNKTFKNILATLLAIGNFLNCSSAKGFE
LSYLEKVTEVKDTVHRQSLLYHTANFVVENFPETSDVYSEIAAITRSAKVDFDQLSESLV
QLERKCKTSWDNLKVIAKHESKPSLKNKLTEFLKDCTERIIILKVVHRRIINRFHSFLLY
LGQPSHSVRDMKVTQFCRIISEFALEYRSTRERSLQQRQKRAAYRERNKTRGKMITETDK
FSSAAGPPESSPAPVSAPSSQQQQGQADEEHENMKNLLIPSAEPSGTRRSRGYYSLGRTS
PSNSTVSKEDSSGSQDDATDEIMDRLVKSVTQNPNQRPSTPKERKRSRANRKSLRRTLKS
GLTPDVAQALGLTNANEV
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagtagtgtgccgagtccagttcctggacgatatggacccttttgtttgcacc
aatttgcctgagcccaggagaccgccaccttacactctgtatgaagacatttccctaatt
gagcaggtggcgggtgtgcataagctgctgggagctcctttaaaattggaagactgtgct
ctgcagttatctccgagtggaaactatatggatttggatttgacactttcagaacagaag
gatgacctggaacagttctatgaagatattagcaaggggaagaagcccgtgctgatcctg
cggaccaagctgtctgttcgagttcatgccatactagaaaaactgttcaactctcatggg
cccgaactgagacgatccctcttctctctgaagcagttatttcaggatgataaagacctg
gtcccggagtttgtgatttcagaggggctgacatgtctcgttaaagtcggagccgaggcg
gatcagaactaccagaattacatcctgagagctctcagtcagatcatgctcttcgtggat
ggaatgaatggtgtgattaaccacagtgagactctccagtggctttacactctcactggc
agcatgcaccgtctggttgtgaagactgctctgaagttgctcattgtgtttgtggagtac
acagagtccaatgctcagcttctcattcaggctgtcagcacggtcagcaggcagagagac
accaagccgtggtcctgtctaattgaaatactggaagagaagaatggagctgacttggag
ctgcttgtattcacaatgacactaataaacaagacactggcagctctaccagatcaggac
tcattctacgatctcactgactgtctggaaacacaaggcatggagactgtcatccacaga
cacatgaacaacaaaggaaccgattcagacctgaagcaccagttcactttatatgagaat
gccttgaggtttgaggatggcgagctggacggggccctgcccagtgtgcagagggaccga
aggaagttggcgccgagcgctgaagaaggccggaagagcaggcgaagttcaggacagaac
atgacagaggcagcgttcgcctccacaaccccgtcctcctgtgcctcccccagccccacc
ctggagagcagcctgcccagtttgaaccgttcccacaggacccccctgcccagcgacagg
gcttccaggtcccaggactcaggatcccagagctcatctcctgcgctctctccagtctct
gggtctcccatcgcatccagcaacggcattcatttccctgccgcagagctccagcagagc
gaggggccccccagcacatcatcttctcactgccctggtcctttcgctagggggcgctca
ttcatcagtcattatgtgccacctctgggcattgggagaaggtctagactctctagcggt
cagtcggtgtccggggaagcatctgccacctctgccagccctgctttccaggactcctct
cccaatgggagccagtcggatctgcactgcactctgccggtgtcggagaaggagggcaca
acttctgaaagaggcattttcaaactgcatcaaactgattctgcttggacagaggaggtt
tgttctgtaaatacggataaacctgtcctaagaaagtttgaaagtcgctttttgcaaagc
ctcgctgctacccaaaaggagaaggacaagaaaaggttgtcgctcagtaaagggaggctg
gatactttgtcttctcaagaagtatcgtcatccccagacattgttgtcaccaccccaaag
ggccgcgaatcgccaagctgttttaaagaagacggggagcatctgagtgcgaaggagcgg
cagagggaggcggcaagcgaggaggagccatgctcagcctcctcctcttcagccagcagc
accctggaacgagaggacaagacaggcgacaggcaggcggcgcataatgatccaggtcaa
agcctccttcggcagagcagtctggagcagcacagcaccctttccagcgacaggaagttc
atgctcgacatgctgtactccaggaacaaagctggggccctgaagacaccccaggaggca
gagaaggtcagggagcaagaggaggtgcaggaaggagagaaggaggaggaggaggagaag
gaaccaagagagggtcagaagccctccagcaaggcccgtctggccagccgcatctctgac
ctggagcccccctacaagtggagcgaggagagccatcagagaccggagatggagagcatg
gtggggagtgtggccccgcaggaagactcctgtcggctccgctccgccgcagcgtccgtc
gtgcctcggggtggaggtgggggtccggacccgttgtcaccccccttaaagactgaggac
agtgccttcgccaagaagaggaagactgtgaagctcttctggaaggagctgaagcagtcg
gaaagccccaggaaatgcacgttcggcaggggcacagtgtgggcctccctggacaaggtg
actgtggacactgccaagctagagcacctgtttgagtctaaagccaaggaactccctact
gctaagaaaggagctgaaattaaaaagcagactgtagttgtgctcgatcccaagagaagc
aatgcaattaacatcgggatgacagtgctgcctccagctcacatcatcaagacggccgtt
ctcaacttcgatgaattcgcaattaacaaggaaggcattgagaaaatcctgaccatggtc
ccgacggacgaggagaagcagatgatccaggaagctcagctggcccaccctgacgttcct
ctgggaaccgctgagcagttcctgcagatgctgtcctccatcagcggactgaccgccagg
ctgcagctgtgggcttttaaactggactatgagagcatggagaaggagattgcagaacca
ttgtttgatctgaagctgggaatggagcagcttgcaaagaataaaacattcaaaaacatt
ctggcaacgctgcttgcaattggaaacttcctcaattgttccagtgccaaaggctttgag
ctgagttacttggagaaagtgaccgaggttaaagacacagtgcacaggcaatccctgctc
taccacaccgctaacttcgtagtggagaacttcccagaaacatcagatgtgtattctgag
atcgcagccatcacacgctctgctaaagtggatttcgaccagctgtcagaaagcctggtt
cagctggagaggaagtgcaagacgtcctgggacaacctgaaggtgatcgccaagcatgag
agcaaaccctccctgaagaacaaactgacggagttcctgaaggactgcacagagcggatc
atcatcctgaaagtggtgcaccgacgcatcatcaacaggtttcattcattcttgctgtac
ctcgggcagccttctcactcagtgcgggacatgaaggtgacgcagttctgcaggatcatc
agcgagtttgctctggagtatcgaagcacgcgggaaaggtccctgcagcagaggcagaag
agggctgcataccgagagaggaacaagacccggggcaagatgatcacagagacggataag
ttctccagtgctgctggccccccggagagcagcccggctcctgtgtcggctcccagctcc
cagcagcagcagggccaggcagacgaggagcatgagaacatgaagaacctgctgatcccg
agtgcggagcccagcggcacccgtcggagcagaggctactacagtttaggtagaactagt
ccatccaattcgacagtgtcaaaggaggacagttcgggttcacaggatgatgccactgat
gaaatcatggatcgtttggttaagtctgttacgcaaaaccctaaccagagaccttcgacc
ccaaaggagaggaagaggtcccgagcaaacaggaagtcgttgcggaggaccctgaagagc
gggctaacccctgatgtggctcaggcgctggggctgaccaatgccaacgaggtgtaa
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integrated database retrieval system
