Polyodon spathula (Mississippi paddlefish): 121296700
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Entry
121296700 CDS
T07273
Name
(RefSeq) thyrotropin-releasing hormone receptor-like
KO
K04282
thyrotropin-releasing hormone receptor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04020
Calcium signaling pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121296700
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121296700
04081 Hormone signaling
121296700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pspa04030
]
121296700
G protein-coupled receptors [BR:
pspa04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
121296700
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_4
7TM_GPCR_Srx
7TM_GPCR_Srv
7TM_GPCR_Srw
V1R
Motif
Other DBs
NCBI-GeneID:
121296700
NCBI-ProteinID:
XP_041078405
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Position
21:complement(13660321..13672489)
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AA seq
408 aa
AA seq
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MENSSRFETPTNVSLVTGTDSVFRSIEYKTISVFLVLLICGIGITGNMMVVLVVLTTRHM
HTPTNCYLVSLAVADLMVLVAAGLPNISDSLSGTWVYGHAGCLGITYFQYLGINVSSCSI
TAFTVERYIAICHPIRAQTVCTVSRAKRIIAFVWVLTSVYCMLWFFLVDINVNKDNKVEC
GYKVSRDLYLPIYLIDFAIFYVTPLLVAIVLYGLIARILFLNPLPNQDDTTTKRWGDKSG
KQKNGSEPGSSKTTNRPQTKRAPSSRKQVTKMLAVVVILFALLWMPYRTLVLVNSFIEKP
YLNACFLLFCRMCIYANSAINPIVYNLMSQKFRSAFKKLCKCGEEETQRRTMYLTPVNYS
MVRGTVTGSPEVKGKKTNKKQEVEGKRGPSQRLQVTVGVDEKIYFSVV
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacagcagtaggtttgaaacgcccaccaatgtctcgctagttactggcacggac
tctgtgttcaggtccattgaatacaaaaccatctctgtgtttctggtgctgctcatctgt
gggataggcatcactggcaacatgatggtggtcttggtggtcctcaccactcgtcacatg
catacccccacaaactgctaccttgtgagcctggccgtggctgacctcatggtgctggtt
gcggctgggctgcccaacatctcagacagcctctctgggacttgggtctatgggcatgct
ggctgcctgggtataacctacttccagtatcttggaattaatgtatcctcctgttccatc
acagccttcactgtggaaaggtacatcgccatttgccatccaataagagcgcagacagtg
tgcacagtatcaagagccaagcgcatcattgcctttgtctgggtcctgacctcagtctac
tgcatgttgtggtttttcctggtcgacatcaacgtcaacaaagataacaaagttgagtgc
gggtacaaagtgtctcgggatctctatctgcccatctacctcattgactttgccatcttc
tacgtcacccccttgcttgtggccatcgtactctatgggctgatcgcgcgcatcttgttt
ctcaaccccctcccaaatcaggatgacaccaccactaagcgctggggagacaagagtgga
aagcagaagaatggatcagaacctggcagcagtaaaaccactaatcgcccccagaccaag
agagcaccctcttcaagaaagcaggtcactaaaatgctagctgttgtggtcatcctcttt
gccttgctgtggatgccctatcgaaccctggtcctcgtcaactccttcattgagaagccc
tatctgaacgcctgtttcctcttgttctgccggatgtgcatctatgccaacagtgccatc
aatcctatcgtgtacaaccttatgtcccagaaattcagatcagctttcaagaagctgtgc
aagtgtggggaggaggagacacagagacgcaccatgtacctgacaccagtgaattacagt
atggtgaggggcacagtgaccgggagccctgaggtgaaagggaagaaaacaaacaaaaaa
caggaggtagaaggaaaacggggtccttcccaaaggctgcaggtcactgtcggtgtagac
gagaagatttacttcagtgtggtttaa
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