Polyodon spathula (Mississippi paddlefish): 121296773
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Entry
121296773 CDS
T07273
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121296773
04082 Neuroactive ligand signaling
121296773
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121296773
Ion channels [BR:
pspa04040
]
Ligand-gated channels
GABA-A
121296773
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF5408
Motif
Other DBs
NCBI-GeneID:
121296773
NCBI-ProteinID:
XP_041078484
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All DBs
Position
22:5216346..5267769
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AA seq
523 aa
AA seq
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MTMLRIRKRSNFGFWTFPLIVAVVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGP
PVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWVP
DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDINFYWRGGDRAVTGVERIELPQFSIVDYNLISKDVVFSTGAYPRLSLSFKL
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPK
IPYVKAIDMYLMCCFVFVFLALLEYALVNYIFFGRGPQRQKKAAEKAATVNNEKIRMEAN
KWMVGNVVQRDDALYARMKQREIDAHDSMWEPIFVEDEAMGLGEQKNKMDPHENILLSTL
EMKNEMATSELTLGLSDPRSTMLAYDSSTLQYRKAGLARHSFGRNAMERHVGQKKSRLRR
RASQLKITIPDLTDVNSIDRWSRVIFPMVFSFFNVVYWLYYVN
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgttgagaatcaggaaaaggagcaactttggtttttggacgtttcccttaata
gtggcagtggtctgtgcgcaaagcgtcaatgaccctagcaatatgtcactggtaaaagaa
actgtggatagactgttgaaaggatatgacattcgcttgaggccagattttggaggtccc
ccggtggcagttggcatgaatatagacattgccagtatagatatggtatctgaagtcaat
atggactatacactgacaatgtatttccaacaagcgtggagagataaacggctgtcatat
tctgagattcctctaaatctaacattggataaccgagtcgctgatcagctctgggtccct
gatacctacttcctgaatgacaagaagtcatttgtacatggggtcacagttaaaaatcga
atgatacgcctgcatcctgacgggacagtcctttatgggttaagaattactacgaccgca
gcttgtatgatggatctgaggagatatcccttggatgaacagaactgcactttagagata
gagagctatggctacaccacagatgatattaacttctactggcgtgggggagatcgtgct
gtgacgggagtggaacggattgagctgccccagttctccattgtagactacaaccttatc
tccaaggatgtggtgttttctacaggggcttaccccaggctctccctcagcttcaaactg
aagagaaacattggatacttcatcttgcagacatacatgccttccattctgatcacaatt
ctctcctgggtctccttttggattaactacgatgcctctgctgccagagttgctttagga
attaccacggtgctcaccatgacaacaattaatactcacttaagagaaaccctccccaag
attccctatgtcaaagccatagatatgtacctgatgtgctgcttcgtgtttgtgttcttg
gccctgttggagtatgcactggtcaactacatcttcttcggaagggggccacagagacag
aagaaggcagcagagaaagcagcaactgtaaacaatgagaaaatacgaatggaagctaac
aagtggatggtggggaatgtagttcagagagacgatgcactgtatgccagaatgaaacag
agggaaattgatgctcatgactcaatgtgggagccaatctttgtggaggatgaagcaatg
ggactgggcgagcaaaaaaataagatggatcctcatgaaaatattttactgagcacactt
gaaatgaagaatgaaatggccacctctgagctcacattgggccttagtgacccaagaagc
accatgcttgcttatgatagttccacccttcagtaccgcaaggctggattggccaggcac
agctttggacggaatgctatggaaaggcatgtgggacaaaagaaaagcaggctacgaagg
cgtgcttcccagttgaaaattaccatccctgacttgactgatgtaaactctatcgaccgg
tggtcgcgggtgattttccccatggttttctccttcttcaatgttgtttattggctctac
tatgtgaattaa
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