Polyodon spathula (Mississippi paddlefish): 121296783
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Entry
121296783 CDS
T07273
Name
(RefSeq) tetratricopeptide repeat protein 28-like isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121296783
Cilium and associated proteins [BR:
pspa03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
121296783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
RPN7
TPR_14
Rapsyn_N
TPR_NPHP3
TPR_11
TPR_17
TPR_6
TPR_16
TPR_9
PUB
ANAPC5
TPR_19
ARM_TT21_5th
TMEM174
Motif
Other DBs
NCBI-GeneID:
121296783
NCBI-ProteinID:
XP_041078493
LinkDB
All DBs
Position
22:21078207..21484631
Genome browser
AA seq
2453 aa
AA seq
DB search
MEKQATRKEKISVFRTKTLGVRSCDMPSLSKAEFIEKVRQSNQACQKGDFHTAIRLYTEA
LEADPQNCILYSNRSAAYMKIQECERALEDAIKARLLNPKWPKAYFRQGVALQYLGRHAD
ALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRDSLEPTYQQLQKMKLDKSPFVVVSVIGQ
ELLTAAHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAYWSLGNTEKSTGYMQQDLEVA
KTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKLKDREAASSALSSLGHVY
TAIGDYPNALASHKQCVLLAKQSKDELSEARELGNMGAVYIAMGDFDNAVQCHEQHLKIA
KELGYKREEARAYSNLGSAYHYRRNFDKAMSYHNHVLELAQELGEQPIEMRAYAGLGHAA
RCMQDLERAKQYHEQQLGIAESLKDRAAEGRASSNLGIIHQMKGDYETALKLHKTHLSIA
QELSDYAAQGRAYGNMGNAFNALGIFDQAVKYHRQELQISMEVNDRASQASTHGNLAVAY
QALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFHCSRGEFLQAVPYYEQYLRLP
AELQDMESEGKVCHNLGYAHYCLRNYQEAVKFYEQDLALAKDLHDKLSQAKAYCNLGLAF
KALGNYNKAEECQKYLLSLAQSLNNSQARFRALGNLGDIFVCKKDVNGSIKFYEQQLALA
HQVKERKLEASAYAALGAAYRLIQKYDKALGYHTQELEVYQELSDIQGECKAHGHLAAVY
MSLGKYTMAFKCYEEQLELGQKLKDPSIEAQVYGNMGITKMNMNVMEEAIGYFEQQLAML
QQLNGNEAVLDRGRGYGNLGDCYEALGDYEEAIKYYEQYLSVAQSLNRMQDQAKAYRGLG
NGHRAMGSLQQALVCFEKRLVVAHELGESFNKAQAYGELGSLHSQLGNYEQAISCLERQL
NIAREVKDRILESDAACGLGGVYQHMGEYDTALQYHQLDLEISEETNNPTCQGRAYGNLG
LTYESLGNFERAMVYQEQHLSTAAQMNDLVAKTVAYSSLGRTHHALQNYSQAVMYLQEGL
RLAEQLGRREDEAKIRHRLGLSLWASRNLEEAQHQLYRASALFETIRHEAQHSTDYKLSL
FDLQTSCYQALQRVLVTLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPYSPVTIDQ
ILETVNSQRGLVLYYSLAAGYLYSWLLAPGAGILKFHEVYLGEGLVESSADPHESSSLSL
QSVSSSMLEQYISNVREALGIESHYTRPCSSSETESEAGDLLDQQFEELHNKLNSVTDPT
GFLRMVSRNNLFNRSCQSMTSLFSNTMSPVKDTSSLPRRQSSLNKPPLRALYDLLVAPME
GGLMHSSGPVGRHRQLILVLEGELYLIPFALLKGSSSNEYLYERFSLIAIPSIQSLSSTA
KSHSKKNAPTYSSPTSMAAVIGNPKLPSSIMDRWLWGPMPSAEEEAYMVSELLGCQPLVG
PAATKERVMSALSQAECVHFATHISWKLAALVLTPNSDGSSGGGGGKGSYGNSYTIPESL
KMQDDASDVESITDSPPLQEFLLTAADILDLRLPVKLVVLGSYQESNSKVTADGVVGLTR
AFLAAGAQCVLVSLWPVPVAASKMFVHAFYSALLNGMKASVALAEAMKTVQSSKQFSHPS
NWAGFMLIGSDVKLNSPSSLIGQALSEILQHPERARDSLRVLLHLVEKSLQRIQNGQRNS
MYTSQQSVENKVGGVPGWQALLTAVGFRLDPTATGLPAAVFFPTADPGDRLQQCSTTLQS
LLGLPHPAFQALCKLISASETGEQLINRAVKNMVGMLHQVLVQLQSGDKEHDFTSTPIQV
SISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGKQASRRTMHFALQSLLALFDSTEL
PKRLSLDSSSSLESLASAQSVSNPMPLGYPNPPFSPTCPDSMASDAISVYSLSSIASSMS
FVSKAESTSEYMSHRGRQDYERGKMFYSQKTSVPRSRSSPHANISANKDDEEYEGFSIIS
NEPLAGNSDSLPLPASHKLLKGNETMSEMARACYGASVSSRGSVSTPTSPIKMTLIPSQN
SPFQKVGKLPSSDTGESDQSSTETDSTVKSQEEKTTKLDPQELAQKILEETQSHLIAVEC
LQRSGSQTSCVSEPIGGASTPTGGSAFRSSEMSAFSRPHSASLKNQSSPIAVRPKPPSRT
SSLQKVSSGYNSPATSETSLKDGSGQPSPTTDPHSLAQFKLKYPTSPYSTHISRSPSNIS
PSSGHQSPSVSNPSPDLSYSSTGSARSSPADAPDLDRLKLAALDEKVQAIHNLKTFWTST
SQHPSGPVRALRGNIGTSKRDVLSLLNLSPRHSKREKGTNNLELKELAIQQGELTLPQKD
PPNGHKRLEPSKVVAPSPSASASSSPGGRPLRLPSGNGYKFLSPGRFFPSSKC
NT seq
7362 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaggcaacaagaaaagaaaaaatttcagtctttagaaccaagacattagga
gttaggagctgcgatatgcctagcctcagcaaagctgaatttattgagaaggttcgtcag
agtaaccaggcatgtcagaaaggagatttccacacggcgatcagactctacacagaggcc
ctggaggcagacccgcaaaattgcatcctctacagcaacaggtcagcggcgtatatgaaa
atccaggagtgtgagcgggccctggaggatgcaattaaagcaaggcttctcaatcctaaa
tggcctaaggcatatttccgacagggtgttgccctccagtacctcgggcgccatgcagac
gcgctggcagcgtttgcctcgggcctggctcaggaccccaagagtctgcagctgttggtt
ggcatggtggaggccgccatgaagtcccctttacgagactctttggagcccacgtaccag
cagctccagaagatgaagctggacaagagccccttcgtggtggtgtctgtgattggccag
gagctcctgacagctgcccaccacggcgcttctgttgttgtcctggaggcggcgctcaag
attgggacctgcagcctgaagctgcgtgggtctgtcttctcggccctgagcagtgcgtac
tggtcgctggggaacacagagaagagcactggttacatgcagcaggacttggaagtagca
aaaactttaggtgaccagacgggcgaatgtcgtgcccacggtaacctgggatcggcattc
ttctcaaaaggcaactaccgcgaggcgctgaccaaccaccgacaccagctggtcctggcc
atgaagctgaaggacagagaggcagcctcttcggcgctgagcagcttgggccatgtttac
acagccatcggggactaccccaacgccctggccagccacaagcagtgcgtcctcctcgcc
aagcaatccaaagatgagctctcggaggcgcgggagctgggcaacatgggagcggtgtac
attgccatgggcgacttcgacaacgccgtgcagtgccacgagcagcacctgaaaattgcc
aaggagctagggtacaagcgagaggaggcgcgggcctacagtaacctgggcagcgcctac
cactaccgccgcaacttcgacaaggccatgtcctaccacaaccacgtgctggagctggcg
caggagctcggggagcagcccattgagatgcgggcctacgccggcctgggccacgctgcc
cgctgcatgcaggacctggagcgagccaagcaataccacgagcagcagctgggcatcgca
gaaagcttgaaggaccgcgctgcggagggaagggcatcctccaacttgggtatcatccac
cagatgaaaggagattatgagactgcactgaaactccacaaaactcatctctccatcgct
caggagctcagtgactatgccgcccaaggtagggcttacggcaacatggggaatgccttc
aacgctttgggaatcttcgaccaagctgtcaagtaccatcgtcaggagctgcagatctcc
atggaggtgaatgaccgggcgtcgcaggcctctactcatgggaatctagcagtagcctac
caggccttaggagcccatgacagagccttacagcactaccaaaaccacctcaacattgcc
agagagctgcgtgacattcagagtgaggcccgggcccttagcaacctgggcaacttccac
tgctccagaggggaatttcttcaggctgtgccctactatgagcagtatctacggctgcct
gctgaactacaggacatggaaagcgaagggaaggtctgtcataaccttggctatgcccat
tattgcctcaggaactaccaagaggctgtgaagttctacgagcaggatctggctttagct
aaggacttgcatgacaaactgagtcaggcaaaggcctactgcaacttgggcctagcgttc
aaggctcttgggaactacaacaaggcagaagaatgccagaaataccttctctccctggcc
cagtcgttaaacaactcgcaggctaggtttcgggcacttggcaacctgggagatatcttt
gtgtgtaagaaagacgtgaacggctcaattaagttttatgagcagcagttggctttggcc
catcaggtcaaggaacggaaacttgaggctagtgcttatgctgccttgggggctgcctac
aggttgatccagaaatatgataaggccttgggataccacacacaagagctggaggtctat
caagaactgagtgacatacagggggaatgcaaagcacatgggcatctcgccgctgtgtat
atgtcattggggaagtacacaatggcctttaagtgctacgaagagcagctagaactgggg
cagaagttgaaggatccgagtatagaggcccaggtctacgggaacatgggcatcaccaaa
atgaacatgaatgtcatggaagaagccattgggtattttgagcagcagttggcgatgcta
cagcagttgaatgggaatgaggctgtgctggaccgagggaggggttatgggaatctgggg
gattgctacgaggccttgggtgattatgaggaagccattaagtactatgaacaatatctg
tctgtagcacaaagcctgaaccgcatgcaagatcaagcaaaggcttaccgggggcttgga
aatggacaccgggcgatgggaagtctacagcaggctctggtgtgttttgagaagcggctg
gtggtggctcatgagcttggagaatcttttaacaaggcacaggcctacggggagctgggg
agtctgcatagccaactgggaaactatgagcaggccatctcctgcctggagaggcaactg
aacatcgctcgcgaggtaaaagaccgcattctggagagcgacgccgcctgtggtctgggc
ggggtctatcagcacatgggcgagtacgacacggccctgcagtaccaccagcttgacctg
gagatctcagaggagaccaataaccccacctgccagggacgggcctacgggaacctaggg
ctcacctacgaatcactggggaattttgagagagccatggtttaccaggagcagcacttg
agcactgcagcccaaatgaacgacttggtggccaaaaccgtggcatacagcagtctagga
aggacccaccatgccttgcagaactactcccaagcagtcatgtacttacaagaaggcttg
aggctggcggagcagctgggccggagggaggatgaggccaaaatccgacaccgcctgggg
ctctcgctgtgggccagcaggaaccttgaggaagcccagcaccagctttatcgagcatca
gcattatttgaaacgattcgccatgaagcccagcacagcactgactacaagctgtccctg
tttgatcttcaaacatcctgctatcaagcactgcaacgtgttctggttaccctcggtcac
catgacgaagcgctggcggtggctgagagaggccgcactcgggccttcgctgacctgctg
gtagaacggcagaccggtcagcaggactcggacccctactccccagtgaccatcgaccag
atcttggagacagtcaacagccagcggggactggtgctctactactctctggcggctggc
tatctctacagctggctcctggcgccaggggcagggatcctgaagttccacgaggtgtac
ctgggagaggggctggtggagagcagtgctgacccccatgagagcagcagcttgagcctg
cagagtgtgagcagttccatgctggagcagtacattagcaacgtgagggaggctctgggc
atcgagtcccactacaccaggccctgctccagcagtgagacagagagtgaggcgggagac
ctgctggaccagcagtttgaggagcttcacaacaagctgaactctgtgaccgaccccact
ggcttcctcagaatggtcagcaggaacaaccttttcaacaggagctgccagagcatgacc
agcctgttcagtaacaccatgtccccagtgaaagacacctcctctctccctcgaaggcag
agttctctgaacaagccccctctgagagccctctacgatctccttgtcgcacccatggaa
gggggtctgatgcactccagtgggcctgtgggtcgccaccggcagctcatcctggtcctg
gagggagagctgtacctcatccccttcgctctgctcaaggggagttcctccaatgagtat
ctgtacgagcggttcagtctcatcgccatcccctccatccaatctctcagcagcaccgcc
aagtcacattccaagaagaacgcccccacctactccagccctacctccatggctgctgtc
attggaaacccaaagctaccctcctccataatggaccgctggctgtggggcccaatgccc
tcggccgaggaagaggcctacatggtgtcggagctgctcgggtgccagcccctcgtgggt
cccgcagcaaccaaggagagggtgatgagcgcgctcagtcaggcagagtgcgttcacttt
gccacgcacatctcctggaagctggcagcgctggtcttgacgccaaacagcgatggttcc
tcggggggtggaggtggtaaaggctcgtacggaaacagctacaccatcccggaatcgctc
aagatgcaggacgatgccagcgatgtggagagcatcacagatagccctcctctccaggag
ttcctgctcacagcggctgatattctggacctccggctcccggtcaagctggtggtgttg
gggtcctaccaagaatcaaacagcaaagtgactgccgacggtgttgtcggtctgactcgg
gccttcttggctgccggggcacagtgtgtcttagtgtctctgtggccggtccctgtggct
gcctccaagatgttcgtccatgctttttattcggccctcctcaatggaatgaaggccagt
gttgccctagctgaagccatgaagactgtccagagcagcaagcagttctctcatccttct
aactgggcagggttcatgctcattgggagtgatgtgaagctgaacagcccctcgtctctg
attggtcaggctcttagtgagatcctacagcaccccgaacgagcccgagactctctgcga
gtgctgctgcacctggtggagaagtctttgcagcgcatccagaacggccagcgcaattcc
atgtacacatcccaacagagtgtggagaacaaggtgggcggggtgcctggctggcaggct
ctcctgaccgcagtgggcttccgcctggaccccacagctactggcctgcccgccgccgtc
ttcttccccaccgctgaccccggggaccgcctgcagcagtgcagcactaccctgcagtcc
ctgctaggcttgccgcaccctgcctttcaggcactgtgtaagctgatcagcgcctcggaa
actggagaacagctaatcaatcgggctgttaaaaatatggtgggaatgcttcatcaagtc
ctggttcagctgcagtccggggacaaggagcacgatttcacctccactcctatccaggtg
tccatcagtgtgcagctctggaggctgccgggctgtcacgagtttctcgcagctctaggc
tttgacctgtgtgaggttggccaggaggaagttgtactgaaaactgggaagcaagctagc
cggaggaccatgcatttcgctctgcagtcgctcttggctctcttcgattctacagagctg
cccaaacgcctcagccttgatagctcctcgtctctggagtccctggcctcagctcagtct
gtttccaaccccatgcccctggggtaccccaatccgcccttctcaccgacctgccctgac
agcatggcttcagacgctatctctgtctacagcctgagctccatcgcctcctcaatgagt
tttgtgtccaaggctgagagcacttctgagtatatgagccacaggggaaggcaagactat
gaacggggtaaaatgttttattctcagaaaacgtcagtgccacgaagcagatcctctccc
catgcaaacatttcagccaacaaagacgacgaggagtatgaagggttctctatcatcagc
aatgaacctttggctggcaattcagactccttgccattgccagccagccacaagctgctg
aaagggaatgaaacgatgtcagaaatggccagagcttgctatggtgcgtccgtgtcttcc
agagggagcgtcagcactcccacctctcccattaaaatgactctgattcccagtcagaac
tcacccttccagaaggtcgggaagctgcccagttcagatactggggagtcggaccaatcc
agcactgaaacagacagcacagtcaaatcccaagaagagaaaaccaccaagctggaccct
caagagctagcccagaaaattttggaagaaactcagagccacctcattgctgtcgagtgt
cttcagaggagtgggagccagacaagttgtgtcagtgaaccaatcggtggtgcttccacg
cccacaggtggctctgctttcaggtcctcagaaatgagtgctttcagcaggccgcatagc
gccagcttgaaaaatcagtcgtctccgattgcagtgaggcccaaacccccgtcgagaacc
tcctcccttcagaaggtgagttcaggatacaacagcccggccacctctgaaacgtccctc
aaagacggatcaggtcaaccatctccgacgacggatccccactctttagcccagttcaag
ctgaaatatccaacttctccatacagcacccacatatcgaggtcgcccagcaacatatcc
cccagctcaggtcaccagtccccttctgtaagcaacccatctccagatctgtcgtattcc
tccaccggctcagcgcgctccagtcctgcggacgctcctgatctggacagactcaaactg
gcagccctcgacgagaaggtgcaagccattcacaatctcaaaacattttggaccagcact
tctcagcacccctcagggccagtgagagcattgcgcgggaatatcggcacctccaaaaga
gatgttctgagtctgctgaacctttctcccaggcacagcaagagggagaaaggcacgaac
aaccttgaactcaaagaactagccatacagcagggggagcttaccttaccgcagaaggat
cctccaaatggccacaagaggctggaacctagtaaggtggtcgctccctcaccctctgct
tctgcaagcagcagtccaggagggagacctctcagactcccatcgggaaatggctacaag
ttcctctcacctggaaggtttttcccatcttccaaatgttga
DBGET
integrated database retrieval system
