Polyodon spathula (Mississippi paddlefish): 121296798
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Entry
121296798 CDS
T07273
Name
(RefSeq) transient receptor potential cation channel subfamily V member 4-like
KO
K04973
transient receptor potential cation channel subfamily V member 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
121296798
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121296798
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121296798
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ion_trans
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
121296798
NCBI-ProteinID:
XP_041078541
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Position
22:complement(26949364..26967675)
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AA seq
833 aa
AA seq
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MTDPEEHPNVAGSGSGDAGDPQPENDSSFPLSSLANLFEGEESAPLPQPRPGETRQNLRI
RFQDAFKKGISNPKDLLESYESPVAPAPKKAPMDSLFDYGTYRQPNANKRQRKKLLRDKR
NVSSIKGPAPDPPLVLKVFTRLLLFDAVSRGDSSDLQGLLPFLLAHKKRLTDEEFREPST
GKTCLPKALLNLYGGCNDTIPLLVEIAEKTGNLREFINTPFRDLYYRGQTALHIAIERRC
KQYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPDMVHYLVQNAHK
KADLRRQDSRGNTVLHALVHIADNTRENTRFLTKMYDLLLIKCAKLYPDCNLETVLNNYG
MSPLMMAARLGKIGVFQHIIRREITDESARHLSRKFKDWAYGPVYSSLYDLSSLDTCGEE
VSVLEILVYNSRVENRHEMLAVEPINELLRDKWRKFGAVTFYISVVSYLVSMVIFTLVAY
YRPSEGKPPYQYQSSTDYLRLAGECITLFTGVFFFLTNIKDLFLKKCPGVSSLFMDGSFQ
LLYFIYSVLVLVTAALYLSGINAYVSVMAMALVLGWMNTLYFTRGLKLTGTYSIMLQKIL
FKDLFRFLLVYLLFMIGYASALVSLLNVCPSSDTPCPEGECPTYPLCRDNTTFSTFLLDL
FQLTIGMGDLDMINSTQYPTVFLTLLVTYIILTFVLLLNMLIALMGETVGKVSKESKKIW
KLQWATTILDIERSFPVCLRKTFRSGEMVTVGKGFDGTPDRRWCFRVDEVNWSHWNQNLG
IINEDPGKNETYQYDGMPTSVRGLRRDRWSSVIPRAVELHKSPRSEEAVVEMY
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgactgacccggaagaacaccctaatgtcgcgggctcgggttctggggacgcaggggac
ccccagcctgagaacgactcctcgttccctctgtcctccctggccaatctctttgagggg
gaggagagcgcccccttgcctcagccccgccccggagagacccggcagaacctacgaatc
cgcttccaggacgccttcaagaagggcatctccaaccccaaggacctgctggagtcctac
gagtcgccagtggcccctgcgcccaagaaagcccccatggattccctgttcgactatggc
acctaccggcaacccaacgccaacaagcgccagaggaaaaagctgctgcgcgataagcgc
aatgtctccagtattaagggtcctgccccggacccccctctggtgctcaaggtgtttacg
cgcttgctgctcttcgacgcggtgtcacggggagactcctccgacctgcaggggctgctt
cccttcctgctggcacacaagaaacgactgactgacgaggagttcagagagccctcgact
gggaagacctgcctacccaaagccctgctcaacctctacggtggctgcaatgacaccatc
cctctgctggtggaaattgccgagaaaacgggcaacctgcgagagttcatcaacaccccc
ttcagagatctctactaccggggtcagaccgctctccacattgccatcgagagacgctgc
aagcagtacgtggagctgctggtggaaaagggggctgacgttcacgcgcaggccagggga
cgcttcttccagcccaaggacgagggtggatacttctacttcggtgagcttcctctatcc
ctggcggcctgcactaaccagcctgacatggtccactacctggtccagaacgcacacaag
aaggcggacctgcggcggcaggactcccgcgggaacacggtgctgcacgctctggtgcat
atcgctgacaacacgcgggagaacacgcgcttcctcaccaagatgtacgacctgctgctc
atcaagtgcgccaagctctacccagactgcaacctggagaccgtgctcaacaactacggc
atgtccccactcatgatggcagccaggctgggcaagatcggggtgttccagcacatcatc
cgacgggagatcacggacgagagcgctcggcacctctccaggaagttcaaggactgggcg
tacggaccggtctactcctccctgtatgatctctcctcgctggacacctgtggggaggag
gtgtctgtgctggagatcctggtctacaacagccgcgtcgagaaccgtcacgagatgttg
gcagtggagccaatcaatgagctcctgagggataagtggcggaagtttggcgctgtcacc
ttctacatcagcgtggtgtcctacctggtttccatggtgatctttactcttgttgcgtac
taccgaccctcggagggaaagcccccctaccagtaccagagcagcacagactacctgcgc
ctggcgggagagtgcatcaccctgttcactggagtcttcttcttcctcaccaacattaaa
gatctgttcctcaagaagtgtccgggggtcagctccttgtttatggacgggtcctttcag
ctgctttattttatctactctgtgctggtgctagtgacggcagcgctctacctgtctggg
atcaatgcctatgtgtctgtgatggcaatggcgctggtgctgggctggatgaacacactc
tacttcactagaggactgaaactcaccgggacctacagcatcatgctgcagaagattctc
tttaaggacctcttccggttcctgctggtctacttgctcttcatgatcggatacgcttca
gccctggtatcccttctgaatgtgtgccccagctctgacacgccctgccccgagggagag
tgccccacgtaccccctgtgccgtgacaacaccaccttcagcaccttcctgctggacctc
ttccagctgaccatcggcatgggcgacctggacatgatcaacagcacccagtaccccacg
gtcttcctcaccctgcttgtcacctacatcatcctcaccttcgtgctgctgctcaacatg
ttgatcgctctgatgggggagacggtgggaaaggtgtccaaggagagcaagaagatctgg
aagctccagtgggccacgaccatcctggacatcgagcgctccttcccagtgtgtctgcgg
aagacgttccgctcgggagagatggtcacggtgggcaagggcttcgacgggacccccgac
cgaagatggtgcttcagggtggatgaggtgaactggtctcactggaaccagaaccttggc
atcatcaatgaggacccagggaagaacgagacgtaccagtacgatggcatgccgaccagt
gtgaggggtctccgcagagaccgctggtcctcggtgatcccacgcgcggtggagctgcac
aagagccctcgctcggaggaggcggtggtggagatgtactag
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