Polyodon spathula (Mississippi paddlefish): 121296809
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Entry
121296809 CDS
T07273
Name
(RefSeq) synaptosomal-associated protein 29-like
KO
K08509
synaptosomal-associated protein 29
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04130
SNARE interactions in vesicular transport
pspa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121296809
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121296809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121296809
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121296809
SNARE
SNAP-25 (Qb,c)
SNAP-29
121296809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
DUF5089
KxDL
Sec20
Motif
Other DBs
NCBI-GeneID:
121296809
NCBI-ProteinID:
XP_041078563
LinkDB
All DBs
Position
22:29304689..29307764
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AA seq
257 aa
AA seq
DB search
MSAYRGSRNPFAEDDDEDFGGKASGSGGWSEPSEAEDRQRWLEQEVMRTAQSAVDSSHRS
LSLIYESEKVGSETAEELIRQGEALKRTERMVDNMDQDLKTSQRHINSIKSVFGGLVNYF
KPKPETKPPPEQPPDYKPSSRLQDALVHSKEQEQNYQASHPNLRKLDAGGFGAEASADYS
SSQSSNGYPKNKQLMTAHKHLDNNLDDMAAGLSRLKNLGLGLQSEIDSQDPILHRLTGKV
DNMDLKIRTTDQQLKKL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgtaccgcggcagtcgcaaccccttcgctgaggatgacgatgaagactttggg
gggaaagcgagtggaagtggcggctggagcgagccgtcagaggcagaggaccgtcagagg
tggctggagcaagaagtgatgcggacagctcagtccgcagtagacagcagccatagatcc
ctctctcttatttacgagtctgagaaagtggggtccgagacagcagaggaattgattcga
cagggcgaggctctgaaacggactgagaggatggtggataacatggatcaggacctgaag
accagccagcggcatatcaacagtataaagagcgtgttcgggggcttggtcaattacttc
aaacccaaaccagagacgaaaccaccaccggaacagcccccagactacaagcccagcagc
agattgcaagatgcattggtccacagcaaggagcaagaacaaaactaccaagcaagccac
cctaatctgagaaagctagatgcaggaggatttggtgccgaagccagtgctgattactcc
tcttcacaaagcagtaatggatatcccaagaacaagcagctaatgacagcccacaaacat
ctggataataacttggatgacatggctgctgggctgagccgtctgaagaaccttggattg
gggttgcagagtgagatagactctcaagacccgatccttcacaggttgactggaaaagta
gacaatatggatttgaaaattaggaccacagatcaacagctgaaaaaactttaa
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integrated database retrieval system
