Polyodon spathula (Mississippi paddlefish): 121296823
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Entry
121296823 CDS
T07273
Name
(RefSeq) growth/differentiation factor 9-like
KO
K22673
growth differentiation factor 9
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121296823
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121296823
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Transforming growth factors (RSTK binding)
121296823
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGF_beta
DUF5078
Motif
Other DBs
NCBI-GeneID:
121296823
NCBI-ProteinID:
XP_041078586
LinkDB
All DBs
Position
22:complement(4909238..4912022)
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AA seq
439 aa
AA seq
DB search
MGTVIKMCFCLCYSAWLVLPNVCDSLCRAKRNSAAGPDDGPPNFEDRHRGTILLSSLLKA
LSDKDGWEDPTPRFRPDSKYLRYMKRLYRMSATNEGVPKLNKSLLYNTVRLFTPQAECLH
KIKEVFTQDLSYSLDRVTAQEHLLKSVLLYSFERAPMAPVASVCRVHLSEQVGPDEQVCS
STQDSFRFYVRMERRTRRKWVEVDVTSFLKPLLGSYRKNIHILVNFTCVEDRRQKSSAQE
QDDQLNHTLKAPSLVLYLNDTSEQAYRRGAPRVRMLSLGNPRPASDPAHFQSPVMVEKTS
LRNRRNAADKELDKQISTPETFSLDEHYKHFEFPTDECELHDFRVSFSQLRWDHWIIAPH
NYNPRYCKGICPRAIGSRYGSPVHTMVQNIIYEKLDSPVPRPSCVPSQYDPLSVLTIEND
GSIVYKEYEDMIATKCTCR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggggactgtaataaaaatgtgcttttgcttgtgttactctgcatggctcgtcttacct
aatgtatgtgacagtctttgtagagcaaaacgaaattccgcggcaggccctgatgacggg
ccaccgaattttgaagaccgtcatcgtggcaccatactgctgtcttctttgctaaaagca
ctctctgacaaagacggctgggaagaccctaccccgcggttcagacccgattcaaagtat
ctccggtacatgaaaagattatacagaatgtctgccactaacgaaggagtgccaaagctg
aataaaagtcttctgtataacacagtaagattgtttaccccgcaagccgagtgcctccac
aaaatcaaagaggttttcacacaagatctgtcttacagcttggatcgcgtgactgcccag
gagcaccttctgaagtctgttctcctctactcgtttgagagagcacccatggctcctgtt
gcgtctgtctgccgtgtgcatctcagtgagcaagtgggtcctgatgagcaagtctgctcg
agcacccaggactccttccgcttctacgtccgaatggagaggaggaccaggcgcaaatgg
gtagaggttgatgtcacatcttttctaaagcctctactgggctcttatagaaagaatatc
cacatccttgtcaatttcacctgtgtggaagacagaagacaaaagagcagtgcccaggag
caagatgatcagctgaaccacaccctcaaggctccttcccttgtgctgtacctgaatgat
accagtgaacaagcctatcggaggggggcaccacgagtaaggatgctgagcttgggaaat
ccaagaccagcatcagatcctgctcatttccaaagtccagtgatggtggagaaaacatcc
ttgcgaaatagaagaaatgcagcggacaaagagctagataaacaaatatcaacacctgag
acttttagtctggacgaacactataaacattttgagttccccacagatgaatgtgagcta
catgatttcagggtgagtttcagtcagcttaggtgggaccactggataattgcaccccac
aactacaaccctcgctattgcaaagggatttgtccaagggctattggttctcgatatggg
tctccagttcacaccatggttcagaatatcatctatgaaaagctggactcccctgtgcca
aggccgtcatgtgtcccatcccaatatgatcccctaagtgttttaacaatcgaaaatgat
gggtccattgtgtacaaggaatatgaagacatgatagctactaagtgtacctgtcgctga
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