Polyodon spathula (Mississippi paddlefish): 121296847
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Entry
121296847 CDS
T07273
Name
(RefSeq) uracil-DNA glycosylase-like isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121296847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121296847
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
121296847
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121296847
Prokaryotic type
121296847
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
GlnD_5th
Motif
Other DBs
NCBI-GeneID:
121296847
NCBI-ProteinID:
XP_041078634
LinkDB
All DBs
Position
22:26784041..26788729
Genome browser
AA seq
304 aa
AA seq
DB search
MLNVGLLRFVCKARVGAGRLDTLTVFFLPRCLTDYAKVTPVKRLKPEENEAPLSPPLSPE
QRDRIERNKRAALERLAARNVPEGFGVSWRKALSAEFAKPYFVRLMAFVAEEQRRHTIYP
PMQQIFSWTQECDIQDVKVVILGQDPYHGPKQAHGLCFSVLKPVPPPPSLENMYKELSED
IEGFEHPGHGDLTGWAKQGVLLLNAVLTVRAHQPNSHKDRGWEQFTDSVVQWLNNNQEGL
VFMLWGSYAQKKGISIDRRRHHVLQAVHPSPFSAHHGFFGCKHFSKTNERLKKSGKKPID
WTAL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacgttggtttgttacggtttgtctgcaaagccagggtaggtgcaggtcgactc
gacacacttactgttttttttttacctcgctgcctcactgactatgctaaggtgacgccg
gtaaagagactgaaaccggaggaaaatgaggcgccgctttcccctccgcttagccccgag
cagcgggaccgaatcgagaggaacaaacgggcggctctggagaggctagcggccaggaac
gttcctgagggcttcggggtcagctggcggaaggctctgagcgctgagtttgccaaacct
tattttgtcaggttaatggcgtttgtagcagaggagcaaagacgtcataccatctatcct
ccaatgcaacagatcttcagctggactcaagagtgtgatattcaagatgttaaagttgta
atcttgggccaggatccgtaccatggtcccaaacaagcacatggtctgtgtttcagtgta
ctgaagccagtcccgcctccacccagcctggaaaacatgtacaaggagctgtctgaagat
attgaagggtttgagcacccagggcatggggacctgactggatgggccaaacaaggtgtc
ttactcctcaatgcggtgctgactgtgcgtgcacaccagcccaattcacacaaggaccgg
ggctgggagcagttcactgactctgttgtgcagtggctgaacaataaccaggaaggcctg
gtcttcatgctgtgggggtcttacgcacagaagaagggcatctccattgacaggaggcga
caccatgtgctgcaggcggtacacccctcccctttctccgcccaccatggattcttcggc
tgcaagcacttctccaagaccaacgagcggctcaagaaatcggggaagaagcctatcgac
tggacagcgctgtga
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