Polyodon spathula (Mississippi paddlefish): 121296848
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Entry
121296848 CDS
T07273
Name
(RefSeq) armadillo repeat protein deleted in velo-cardio-facial syndrome homolog isoform X1
KO
K28154
splicing regulator ARVCF
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121296848
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121296848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
HEAT_EZ
Arm_2
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
121296848
NCBI-ProteinID:
XP_041078636
LinkDB
All DBs
Position
22:complement(29560513..29692023)
Genome browser
AA seq
1033 aa
AA seq
DB search
MDEYDVRSAASILASVKEQEARFEHLTRALEEERRNVSLPSERLSMCNAGSSSQPLAWQQ
IVLQERSPSNQTSRAMMQEPPEVLEETVTIEEDPGTPTSHVSVVTSEDGTTCRTETKVTK
VVKTITRRTFHPVTVTERLLDSRPDTPTPETDPVTKMVKTVTTRTVRQVPLGPDGLPIPD
GSSPLGSYTDSIDRRYLKNGDRYITPQATSTLTRSFNNYSDSYSDSPDNQHRHYSIHDSY
ADMSDNYGSLSRGVNYRPRYGYMPANYRPENSYTLPIRKEDYGHIAQPQVPLGSSAELNR
SQPERFQPEPYGLEDDRRSLGPEEEEAYDLEPDYSTANRRTLTSADRGRPGREPIREPSG
EPMMRDPVRGRVCYEDPIEAELIDERHPYLQGIYTAPLAQPERGSMASLDRMGRHSPSID
SMRKDPRWRDPDLPEVIAMLGHPIDPVKSNAAAYLQHLCYENDRIKKDVRHLKGIPILVG
LLDHPKPEVHRKACGALRNISYGKDNDNKVSIKNCDGIPALVRLLRKTSDMEVRELITGT
LWNLSSYEPLKMVIINHGLQTLTNEVIIPHSGWEHEPNEDSKPRDAEWTTVFKNTSGCLR
NVSSDGAEARRRLRECGGLVDALLHALQSAVGKKDMDNKSVENCVCIMRNLSYHVHKEVP
GAENFLEPAANQSGGTGALQKKKKDDAGCFGGKKAKEEWFDQGRKNGENDKNYDTLDLPK
RTEPTKGFELLYQPEVVRLYLSLLTESQNYNTLEAAAGALQNLSAGQWTWSMYIRATVRK
EKGLPILVELLRSDSDKVVRAVAIALRNLSIDRRNKDLIGSYAMRDLVSNLPSGQQRPAK
NLEEDTVVAILNTTHEIVTDSSENARSLVQAQAIEKLVAINKTSQSSRETKAASHVLQTV
WSYKELRNALHKEGWNKTHFQPAAAAPPKGSKSGGKPGYDDSTLPLMEKNQGNKKSGSAD
MIPMDELGPDAYSTIDHRDKESRYKTRDGSRDVAERDPLKNDTNRKNFIRSNRPKVNLVD
GFDTEHQPVDSWV
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtatgacgtgagatcagccgctagcattctagcctcggttaaagagcaggag
gctcgctttgagcatctaacccgggccctcgaggaggagcggcgcaacgtcagcctgccc
tcggagcgactgagcatgtgcaacgctggcagcagcagccagcccctggcgtggcagcag
atagtactgcaggagcggagccccagtaaccagacctccagagccatgatgcaggagcct
ccagaggtgctggaggaaacggtgactattgaagaggacccgggaacgcccacctcccac
gtttccgtggtaacgtcggaggatggaactacttgccggactgagacaaaggtgaccaag
gttgttaaaaccatcactcgccgcaccttccacccggtgacagtaacagagaggctgctg
gattcccggccggacacccccactccggagacagaccctgtcaccaaaatggtgaaaacc
gtgaccaccaggacggtgcgccaagttcccctggggccagatggcttgcccatcccggac
gggtcttcccctctcggcagctacacggattccatcgaccggaggtacctgaagaacggg
gaccgctacatcaccccacaggccacctccaccttgaccagatccttcaacaactacagc
gattcctacagcgacagccccgataaccagcaccggcactacagcatccacgacagctac
gctgacatgtccgacaactacggcagcctttccagaggggtcaactaccggcctcgctat
ggctacatgccagcaaactaccggccggagaacagctacaccctgcccatcaggaaggag
gactacggacacatagcccagccacaggtgcccttaggcagcagcgcagagctgaaccgt
tcccagccggagcgcttccagccggagccgtacggtttggaggatgaccggcgcagtctg
gggcctgaggaagaggaggcttatgacctggaaccagactactccacagccaataggagg
actcttaccagtgctgaccggggcagaccaggcagagagccaatcagagagccaagtggg
gagcccatgatgagagacccagttcgaggaagagtctgctatgaggaccccatagaggcg
gaactgattgatgagcgccacccctacctgcagggcatctacacagctcctctggcccag
cccgagcgaggcagcatggccagcctggaccgcatgggccgtcactcgccctccattgac
agcatgcgcaaagacccccgctggagggaccccgacctgccagaggtcatcgccatgctg
gggcaccccatcgacccggtcaagtccaacgcggctgcctatctgcagcatctctgctac
gagaacgacaggatcaagaaggatgtgcgccacctgaaggggatccccatactggtgggg
ctgctggaccaccccaagcctgaagtgcaccgcaaggcctgcggagccctccgcaacatc
tcctacggcaaggacaacgacaacaaggtgtccatcaagaactgcgacggcatccccgcc
ctcgtccgcctgctgaggaagaccagcgacatggaggtgcgggagctcatcacaggcacg
ctgtggaacctctcctcctatgaacccctcaagatggtcatcatcaaccacggccttcag
accctgacaaacgaggtgatcatcccccactcgggctgggaacacgaacccaacgaggac
tccaagcctcgggacgcggagtggacaaccgtcttcaagaacacgtccgggtgtttgagg
aatgtgagttcggacggtgcggaggctcggcggcggctgagggagtgcggtggattggtg
gatgcgcttctccatgctctccagtcagctgttgggaagaaggacatggacaataagtct
gtggagaactgcgtgtgcatcatgcggaacctgtcctatcacgtccacaaggaagtgcca
ggggcagagaacttcttggagcctgcagccaatcagagcgggggcacaggagcactacag
aagaagaagaaggatgacgcagggtgtttcggagggaagaaagcgaaggaggagtggttt
gatcaaggaaggaagaatggagagaatgacaaaaactacgatactctggatctgcccaag
cgcaccgaaccaaccaaagggttcgagttgctttaccagccagaggtggtgcgactgtac
ctgtcgcttctcaccgagagtcagaactacaacacgctggaggctgcagccggggctctg
cagaacctcagtgcaggacagtggacttggtcgatgtacatcagagctaccgttcggaaa
gagaaaggcctgccgatcctggtagagctgctgaggtccgactcggacaaggtggtgcgg
gcggtggccatcgctctccgaaacctgtccatcgaccgccgcaacaaagacctgataggc
agctatgccatgcgggacctggtgagtaacttacccagcgggcagcagagaccagccaag
aacctggaggaggacacggtggtggccattctcaacaccacccacgagattgtaacggac
agctcggaaaatgccaggtccctggtacaggcacaggccatcgagaagcttgtagccatc
aacaaaaccagccagtcttcgagagagacgaaggcagcctctcatgttctacagacggtg
tggagctacaaggagctgaggaacgctctgcacaaggaaggctggaacaaaacacatttc
cagcctgcagcagctgcccctcccaaaggttcaaagagtggagggaagcccgggtatgat
gacagcactctcccattgatggagaagaaccaaggaaacaagaaatctggcagtgctgat
atgataccaatggatgaacttgggccagatgcatattcaacgattgatcacagagacaaa
gagagcaggtacaagactagggacggatcgagggatgtggcagaaagggatcctttaaag
aatgacacaaataggaaaaactttatcaggagcaacaggcccaaagtgaatctggtggac
gggtttgatactgaacatcagcctgttgactcctgggtctaa
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