Polyodon spathula (Mississippi paddlefish): 121296861
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Entry
121296861 CDS
T07273
Name
(RefSeq) zinc finger matrin-type protein 2-like
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121296861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121296861
Spliceosome [BR:
pspa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
121296861
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
zf-U1
SNRNP27
C2H2-zf_KIN17
MG280
DUF4250
zf-C2H2
FD_BcsB_2nd
DUF7828
Motif
Other DBs
NCBI-GeneID:
121296861
NCBI-ProteinID:
XP_041078668
LinkDB
All DBs
Position
22:complement(10117369..10126210)
Genome browser
AA seq
198 aa
AA seq
DB search
MASGSGAKNDFRRKWDKDEYEELAQKRLTEEREKKDGKPFPPVKRELLRHRDYKVDLESK
LGKTIVITKTTPQAEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQ
VKKRFEANKKRIEEKQKEYDFEERMKELREEEEKAKAYKKEKQKEKKRKADEDLNFEEDD
EMAAVMGFSGFGSSKKGH
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggcagtggggcaaaaaatgacttccgaaggaagtgggacaaagatgagtat
gaagagttagctcagaagcgcttgacagaagaaagggaaaagaaagatggcaaacctttt
ccccctgttaagcgggagcttttacggcacagggactacaaggtggacctggagtcgaag
ctggggaagaccattgttatcaccaaaactaccccccaggctgagatgggaggatattac
tgcaatgtctgtgattgtgtggttaaggattctattaactttttggatcatatcaatggc
aaaaaacatcagagaaacttgggtatgtcaatgagggtggaacgatcgtctctggatcag
gtgaagaaaagatttgaggcaaacaagaagaggattgaggaaaaacaaaaagagtatgac
tttgaagaacgaatgaaggaactccgggaggaggaggagaaagcaaaagcatacaagaag
gaaaagcagaaagagaaaaagcgcaaggctgatgaagatctcaactttgaggaagacgat
gaaatggctgcagttatgggattctcaggctttggttcctcaaaaaaaggccactga
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