Polyodon spathula (Mississippi paddlefish): 121296876
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Entry
121296876 CDS
T07273
Name
(RefSeq) rho GTPase-activating protein 10-like isoform X1
KO
K13736
Rho GTPase-activating protein 10
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121296876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121296876
Membrane trafficking [BR:
pspa04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121296876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
RhoGAP
PH
SH3_9
SH3_1
SH3_2
IMD
PaREP1
DUF5975
Motif
Other DBs
NCBI-GeneID:
121296876
NCBI-ProteinID:
XP_041078703
LinkDB
All DBs
Position
2:complement(43487848..43568421)
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AA seq
786 aa
AA seq
DB search
MGLLPLEFSDCYLDSPAFRDRMKAHEAELEKTNRFIKELNKDGKNLITATKNLSVAQRKF
AQSLGEFKFEYIGDAKTDDEKCIDESLHEFASFLKNLEEQREIMLFNITETLLKPLEKFR
KEQLGAAKEERKKYEKDTEKYYSAVEKVLSMSAKKKDQQLLEADNQVEVMRLHFHEESLE
YVCKLQEIQEKKKFDCVEPMLAFFQAVFTFYHQGYELAQDFSHYKTKLQINIQNTRNRFD
GTRSEVEELMKKIKQNPEAHKWNSPLSIEGYLYVQEKRPPPFGSSWVKKYCIYLKEQKIF
NMVSFDHRSGGKTGEPESFILKSCTKKTGDSIDRRFCLELEVADRPGLIITVQALSEDDR
KQWMQAMGGKEPVCKLGRTYSKREGIEAHLDEIGLSLLKNCIGAVESRGITDQGLYRVVG
VSSRVMKLVGLLMDEKTYREVDLSSSDEWDIKTVTSALKQYLRVHSVCEVHHTRSLPEPL
MTYKLFKAFIVPAKCDSPESRVNAIHYLVYKLPEKNLEMLGMIIKHLANVSANCKQNLMT
VANLGVVFGPTLMRPEEETVAAIMDLKFQNIVVEILIENHEKIFGSAPDGSPTKSVALSS
SEPSAPPRLSKRQNSHQNRPLAVYNPSVEFQAADCPNPVKDETLMGSTGSVSSQSSTATT
SSTSGSPPEDTKNHFTTNGGDLVDWASISHPSAVPQINASSLTTPTASSPAATFSPEGTN
NDKPGDSVTYRKAKAVFSCEAEHDSELSFPVGAIFEDVTSSKEPGWLDGTLDGKRGLIPK
NYVEFL
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgggtcttctcccattggagttcagtgattgttacctggacagccctgccttcagggac
agaatgaaggctcatgaagcggagctggaaaagaccaacaggtttattaaagaacttaat
aaggatgggaaaaacctcatcacagcaaccaaaaatttatctgtggcccaacgcaagttt
gctcagtcacttggagaattcaaatttgagtatattggggatgccaaaactgatgatgag
aaatgtattgatgaatcgctacatgaatttgcatcttttctaaaaaacttggaggaacaa
agggaaataatgttgtttaacatcacggagacgctgctgaaacctctggagaagttccgt
aaagagcagctgggggctgcaaaggaggaaaggaaaaaatatgaaaaagacacagagaag
tactacagcgctgtggaaaaggttttaagtatgtcggcaaagaagaaagatcaacagctg
ctggaggcagacaaccaagtggaggtgatgagactacattttcacgaagagtcgctggaa
tatgtttgcaaactgcaggaaatccaggaaaagaagaagtttgattgtgtagagccaatg
ctggctttcttccaggcggttttcacgttttatcatcagggatatgagcttgcacaagac
ttcagccattacaaaacaaaactgcagattaacattcaaaatacaagaaatcggtttgac
ggtaccagatcggaagtagaagaattgatgaaaaaaatcaaacaaaacccagaagcacac
aagtggaacagcccgctcagcattgaggggtacttgtacgtccaggagaagaggcctccc
cctttcggctccagctgggtgaagaagtactgtatttatttgaaagagcagaagattttt
aacatggtttcatttgatcacagatctggagggaaaacgggggaaccggagtctttcatc
ctgaaatcctgcacaaagaaaacaggagattctatcgacaggaggttttgtttggagcta
gaggtagctgaccgaccaggtctcattatcaccgtgcaggccttgtcagaagatgatcgg
aagcagtggatgcaggctatgggaggcaaagaacctgtctgtaagttgggcagaacttat
tcaaagagggaaggaattgaagcacacctggatgaaataggactttcacttttaaaaaat
tgtatcggcgcagttgagtccagagggattactgatcaggggctgtacagagtcgttggc
gttagttccagggtgatgaagcttgtggggctattaatggatgaaaagacatacagagaa
gttgacctctcttcttctgatgaatgggacataaaaacagtaactagtgcactaaagcaa
tatttaagagttcactcggtgtgtgaagttcatcatacaaggagtcttccagaaccactg
atgacctacaagttattcaaagcattcatcgtccctgccaaatgtgacagtccggagtcc
agagtaaatgcaatacattatttggtttataaacttccagagaaaaacctggagatgttg
ggaatgataataaaacacttagccaatgtctctgctaactgcaaacagaatctaatgacg
gtagcaaatttaggagtggtgtttgggcctacactgatgagacctgaagaggaaactgtg
gctgcaattatggacctcaagttccagaatattgtggtggaaattctgatagaaaaccat
gagaagattttcgggagcgcaccagatggatctcccaccaaatctgtggccttgtcttct
tctgagcccagtgccccgcccaggctgtccaagagacagaactcccatcagaaccggcct
ctagcggtgtataaccccagtgtggagttccaagctgctgattgtcccaaccctgtgaag
gacgagaccttgatgggaagcacaggttctgtttcctctcagtcttccactgctaccact
tcatctacctccggcagccctcccgaggacactaagaatcatttcactaccaacggagga
gaccttgtggactgggctagcatttcccacccttcagcggttccacagattaatgcttca
tcgctcaccacccctactgcttcatcgccagccgccaccttctcgcccgaaggaactaac
aatgacaagccgggagacagtgtcacatacaggaaagccaaagcggtattttcttgtgaa
gcagagcacgactcagagttatcattccccgtcggagcaatatttgaagatgtgacttct
tccaaagaaccgggatggctggatggaacacttgatggaaaacgcggacttattccaaaa
aactatgttgagtttctatag
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