KEGG   Polyodon spathula (Mississippi paddlefish): 121296947
Entry
121296947         CDS       T07273                                 
Name
(RefSeq) protein bicaudal C homolog 1-A-like isoform X1
  KO
K18756  protein bicaudal C
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pspa03019]
    121296947
Messenger RNA biogenesis [BR:pspa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121296947
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 SAM_1 SAM_2 KH_Vigilin KH_GLD-3_1st KH_Mug60-KHD4 KH-I_KHDC4-BBP KH_PARP14_6
Other DBs
NCBI-GeneID: 121296947
NCBI-ProteinID: XP_041078839
LinkDB
Position
22:9311036..9327827
AA seq 874 aa
MATVKESLELQTASAKIPPPEDPNSCSSKEDWGESCPEPSEETLGDAGETAPTDPESVEE
RFRIDRKKLETMLHTPGDENHLTGEEFFQKVMTETNTQIKWPSKLKIGAKSKKDPHVKVE
GKKADVLEAKKMILEVLETKVNKVTLKMDVAHTEHSHVIGKGGGNIKKVMEETGCHIHFP
DSNRNNVHLEKSNQVSIAGSLSGVESARRRIRDLQPLVLSFDLPMRMVSHTVPDVNSPVI
HHISQAFNISVSFRQQPKLYSTTCLVRGLQGNCVSIQKATAVLMELLLGADPSVSVSTQV
DLTSQQHVFLMGQNGANFINIMHMTQTQIVFPDLNCPQNRAMLLIQGTADTVCLAKQQLQ
DCLPLCLMFDLKEDAEVEPHKLSQMMQNLGVFISIKPKVKQTAKSVVVKSLERNTVNMYE
ARRLLLGLDTSEVAMATKPACDIPLTNGLTNYWLNLVTQQLSFTDSGPVPSFGAVVNAVL
QAKAKPAPPPGLTLQHQADRESQKNNGKKPTEMNKNMLSEAEDLQSTPTADRPSADTVPE
SEETQGTGVGISRRSSQSENSKEPWQEGSTAASRQNTALQNLKELLLKCDFGSDYSEKPS
NLRKDIIELPETDPDAIKNEDYDYEKKKLLATRAMLKKPVETEVRTPTDTWSGLGFSKSM
PAEAVKELRCLNRRSYKSYLGNNLQERSLQESFSRESLASGSDSENWRERRDSASSSSAL
SSSSASSFPVFASSSLRSRGDKSSELFHSSSNYFDSISSLTCSSNCCSSPTHKQTADLPE
LFSQLGLGKYIDIFQQQEIDFQTFLTLTDEDLKEVGISTFGARRKMLLAISDFSKSKKKL
LDPPTVRPGYLEGGASGRLPRIADMDIAAQSNRW
NT seq 2625 nt   +upstreamnt  +downstreamnt
atggccactgtaaaggagagtcttgagctccagactgcctctgccaagataccccctcca
gaggaccctaattcatgctctagcaaagaagactggggagaaagctgcccggaacccagt
gaggaaactctgggtgatgcaggggagacagcccccacagacccagaatcggtggaggag
agattcaggatcgacaggaagaaactggaaactatgttacacacccctggagatgaaaat
cacttaactggtgaagaattctttcaaaaggtgatgactgaaaccaacacacagatcaaa
tggccttccaagctgaagataggtgctaaatcgaagaaggatccacatgttaaggtggaa
gggaaaaaagctgatgtcctggaagccaagaagatgatattagaggttttggaaacaaag
gttaacaaggtgaccctgaagatggacgtggcccacactgagcactcccatgtaatcggg
aaagggggcggcaacattaagaaggtcatggaggaaacaggctgccatatccacttcccc
gactctaaccgaaacaatgtccatctggagaagagcaatcaggtttctatagctggatca
ctgtctggtgtggagtctgccaggagaagaataagggacctgcaacctttggttctaagc
tttgacctgccaatgagaatggtctctcacacagtaccagatgtgaactctcctgtgatc
catcacatcagccaggcctttaatatcagcgtgagcttcagacagcagccaaaactctac
agcaccacctgtctagtgagaggactgcaggggaactgtgtctctatccagaaagccact
gcggtgctaatggagctgctgctaggtgcagatcccagcgtcagtgtcagcacccaggtc
gacctcacctcccagcagcatgtcttccttatgggacagaatggagccaacttcatcaat
atcatgcacatgacccagacacagattgtgtttccagacctgaactgtccacagaacaga
gccatgctgctcatacagggcactgcagacactgtctgtctggccaagcagcagctgcag
gactgcctcccactctgcttgatgttcgatctgaaggaggatgctgaggtggagccccac
aaactcagtcagatgatgcagaaccttggagttttcatcagcatcaaacccaaagtgaag
cagacagccaagtctgttgtagtgaagagtttggaacgaaacactgtcaacatgtatgaa
gccagaagattgctgttgggcctagacaccagtgaggttgccatggcaacaaagcctgcc
tgtgacattcccttaacaaatggcctaactaattattggctgaatttggtaacacaacaa
ctgagcttcactgattcaggacctgtcccctcgtttggagctgtggtaaatgctgtactg
caggctaaagccaaaccagcaccccctcctggtctcaccctgcaacatcaagcagacaga
gaatcacaaaagaataatgggaagaaacccactgaaatgaataaaaatatgctttcagag
gctgaggatttgcagagcacccccacagcagacagaccatctgcagacacggtgccagag
tctgaagaaacacagggcacgggggtgggcataagcagaagaagcagccaatcagagaac
agcaaagagccctggcaggaaggaagtacagcagcctcacgtcaaaacactgcacttcag
aacttgaaagaattattgctaaaatgtgatttcggaagcgactactcagagaaaccaagc
aatttaaggaaagacataattgaactaccggaaacagacccagatgctataaaaaatgag
gattatgattatgaaaaaaagaaacttttagcaacacgagcgatgctgaagaaaccggtg
gagactgaggtgcggacacccacagacacctggagtgggctgggcttttccaagtcaatg
ccagcagaggccgtgaaggagctgcgatgtctgaaccgccggagctacaagtcttacctt
gggaacaacttacaggagcggagtttgcaggaatccttcagtagagagagtctggccagc
ggcagtgactctgagaactggagggagcgaagggactctgcatcttcctcatctgctctc
tcatcttcctcagcctcctccttccctgtctttgcctcctcatccttgagaagcagaggt
gacaaatcctcagagttgttccacagcagcagtaattactttgacagcatctcatctctg
acctgctccagcaactgctgctccagtcccacccacaaacagacagctgacctgcctgaa
ctcttcagccagctggggctgggcaaatacatcgatatcttccaacagcaggagattgac
ttccagacattcttaacactcactgatgaggatctgaaagaagtggggatttcaactttt
ggtgcaaggagaaaaatgctgcttgcaatttcagatttcagtaaaagtaaaaagaagctt
ttggatccgcctacagtgcgaccaggctacctggaaggcggggccagtgggaggctgcct
cggatagcggacatggacattgctgctcaaagcaaccgctggtag

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