Polyodon spathula (Mississippi paddlefish): 121296998
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Entry
121296998 CDS
T07273
Name
(RefSeq) uncharacterized protein LOC121296998 isoform X1
KO
K13886
coronin-1B/1C/6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121296998
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121296998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40_4
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR35_TULP_N
EIF3I
Beta-prop_EIPR1
Beta-prop_IFT140_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF12
eIF2A
Motif
Other DBs
NCBI-GeneID:
121296998
NCBI-ProteinID:
XP_041078925
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All DBs
Position
22:complement(26705374..26744010)
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AA seq
971 aa
AA seq
DB search
MHLEREPPSSDGMGKEGVKAGSAAHETPEDIKGCQTDLEEQDMEGTESAGLMNSAVLHSM
GGKEVTDSAADHKGDSMCRKGDQGSNEDVNMENVAQLQNSPTLTGQVPVHPPIKCSREED
NVKSLSLELATGGDVPRSGFEVKFPLQGKSVPVEATDEEVVCLLALQVHQGKSRLKDDKE
SDEGSGVLEKMESYEEGPQFQESKDIHKDLLGVPQVEKDKNICFSGTLEESSLHLVIDQI
ANPEHVQVSTENTKESEQSIQESKCITEAGDINWASKAKEKPIEHLEQQSGGSPKDVNAD
GVLFQSCKDKPEEDASAQCSKDNNDIKAGGDQLNSIIASPCPSQAQEAGGVGAQTPSQFR
NEQQGDREPGLASDTGTEETSPREKNGQDPKSRTSPPKTVKSMLKESDLCSMGAEPQHWA
EATLPSGKADLGFGKPVEVTVTENSKLLASLNPGEREQELAAEQGQAVKVAVMKMTFDTP
KKTKAAEVKSTPRKDMFRRVVRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPK
FVAIIIEASGGGAFLVLPLHKTGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCT
VMVWQIPENGLALPLSEPAVVLEGHSKRVGIVSWHPTARNVLLSAGCDNLIIVWNVGTGE
AMINLEDMHQDMIYSVCWNRNGSLICTTSKDKKIRVIDPRKEKITVEKDKAHEGARPMRA
IFLSDGNIFTTGFSRMSERQVALWNPQNMDEPIALHELDSSNGVLLPFYDPDTNVVYLCG
KGDSSIRYFEVTEESPYVHFLNTYSSKEPQRGMGYMPKRGLDVNKCEISRFYKLQERKCE
PIIMTVPRKSDLFQDDLYPDTAGPDAALEAEDWFEGKNADPILISLKHGYIPGKNRDLKV
VKKNLLDNKLAVKKKAEISGSGNKPVSSTPSIQNEAKLDEILKEIRTLKDLIGSQDKRIA
KLEEQMSKIAI
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgcacttggaacgagagccccccagcagtgatggaatgggaaaggaaggagtgaaggca
ggcagtgctgctcatgaaacgccagaggacatcaagggttgtcaaactgacttggaagaa
caagacatggaaggaacggagagtgctggtttgatgaacagcgctgttctgcattcaatg
ggtggcaaggaggtgactgactctgcagcagaccataaaggggacagcatgtgtagaaaa
ggagatcagggatcaaatgaggatgtgaatatggaaaacgtggctcagctccagaacagc
cccacactaactgggcaggtgccggtccatcctccaataaaatgttccagagaggaggac
aatgtgaagagcttgtcattggagctggctactggaggggatgtgcctcgttcaggattt
gaggttaaatttcctctgcaggggaaaagtgtaccagtggaggctacagatgaggaggtg
gtgtgtcttcttgctttgcaggtccaccaagggaagtccagactcaaggatgacaaagaa
tctgatgagggttctggagtgcttgagaagatggaaagttatgaagaaggtcctcaattt
caagaaagcaaagatatccacaaggacctccttggtgttcctcaggttgagaaagacaaa
aatatttgtttcagtggaacccttgaagaatccagcctacatctagttatagaccaaata
gcaaacccagagcatgtacaagtttcaactgagaacaccaaagaatctgaacaaagtatc
caggagagcaaatgcattacagaggcaggggatatcaactgggcctccaaagccaaagag
aagccaattgagcatctggaacagcagagtggggggagccctaaagatgtcaatgctgat
ggagtgcttttccagagttgcaaagacaaaccggaagaggatgccagtgcacaatgttca
aaagacaacaacgatattaaagctggaggagaccagctcaacagcatcatagccagcccg
tgtccttcacaagctcaagaggctggaggtgttggtgcacaaaccccctcccagtttaga
aatgagcagcaaggtgacagggagcctggtcttgcctccgacacgggaacggaggagact
tcacccagagaaaaaaacgggcaagaccccaaatcaagaacaagcccaccaaaaacagtg
aagagcatgttgaaagaaagtgatctgtgttcaatgggagcggaaccccaacactgggca
gaagccacgctgccctccggcaaggctgatctgggattcgggaagcctgtggaggttact
gttactgaaaattcgaagctactggcttctctgaatcccggggagagagagcaggagctc
gctgcagaacaaggtcaagcagtgaaagtggctgtgatgaaaatgacattcgacaccccc
aaaaaaaccaaggcagcagaggtgaagagcacacctaggaaagatatgttcaggcgcgtt
gtgcgacagagcaaattccgtcatgtctttggccaggcggtgaagaacgaccagtgttac
gatgacatccgggtctcgcgggtcacctgggacagctccttctgcgcagtcaaccccaaa
ttcgttgccataatcattgaggccagtggcggcggcgccttcctggtactccctttgcac
aagactggtcgaattgacaaatcctaccctacagtatgtggccacacgggacctgtgttg
gacattgactggtgtccacacaatgatcaagtcattgccagtggatctgaggactgcact
gtcatggtgtggcagatccctgaaaatggccttgcgctccccttgtccgagccagccgtg
gttctggagggtcattccaagagggtgggcattgtgtcgtggcaccccaccgcacgcaac
gtcctcctcagcgctggttgtgacaatttgatcattgtgtggaatgtggggaccggggaa
gccatgatcaatctggaagacatgcaccaggacatgatctacagcgtgtgctggaaccgc
aacggcagcctgatctgcacaacctccaaagacaagaaaatccgggtcattgaccccagg
aaggagaagatcactgttgagaaagacaaagcccacgaaggagcccgccccatgagagcc
atcttcctctccgacgggaacatcttcaccacaggattcagccgcatgagcgagcgacag
gtcgcactctggaacccgcaaaacatggatgagccgattgcactgcacgagttggacagc
agcaacggagtgctccttcccttctatgacccagacaccaacgtggtttacctatgtggt
aagggggatagcagcattcgctactttgaagtgacagaagaaagcccctatgttcatttc
ctcaacacctacagcagtaaggagcctcagagagggatgggctacatgccaaagagaggg
ctggacgtcaacaagtgtgagatttccaggttttataaactgcaggagaggaagtgtgaa
cctattatcatgactgtacccaggaagtctgacctgttccaggatgacctgtaccccgac
acagccggccccgacgctgccctggaggcagaggactggttcgagggcaagaatgccgac
cccatcctaatctccctgaagcatggctacatccccggcaagaaccgtgacctcaaggtg
gtcaagaagaacttgctggacaacaagctggccgtcaaaaagaaggcagagatctctggc
tctgggaacaaacctgtgtcctcgacgccctccatacaaaacgaagccaagctggatgag
atcctgaaagaaatcagaacccttaaagaccttattggcagccaagacaagcgaatcgcc
aaactagaagagcaaatgtcaaagattgcaatctaa
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