Polyodon spathula (Mississippi paddlefish): 121297014
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Entry
121297014 CDS
T07273
Name
(RefSeq) stress-70 protein, mitochondrial
KO
K04043
molecular chaperone DnaK
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121297014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121297014
03110 Chaperones and folding catalysts [BR:
pspa03110
]
121297014
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121297014
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121297014
Messenger RNA biogenesis [BR:
pspa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
121297014
Chaperones and folding catalysts [BR:
pspa03110
]
Heat shock proteins
HSP70 / DNAK
121297014
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
121297014
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
121297014
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121297014
Exosomal proteins of breast cancer cells
121297014
Exosomal proteins of colorectal cancer cells
121297014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
FtsA
Thioredoxin_2
Alp7A_like_C
Drf_FH3
Motif
Other DBs
NCBI-GeneID:
121297014
NCBI-ProteinID:
XP_041078960
LinkDB
All DBs
Position
22:699204..709589
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AA seq
682 aa
AA seq
DB search
MMLSAARTASQTLLLTRAGCARSGASLATNKGCWNGLSQDVLRTVSRRDYASEAIKGSVI
GIDLGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTADGERLVGMPAKRQAVTNPNNT
LYATKRLIGRRFDDAEVQKDLKNVPYKIVRASNGDAWVEAHGKMYSPSQVGAFVLMKMKE
TAESYMGHSVKNAVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKSQ
DKIIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLRHIVKEFKRESGV
DLTKDNMALQRVREAAEKAKCELSSSLQTDINLPYLTMDASGPKHLNMKLTRSQFEGIVG
DLIRRTVAPCQKAMQDAEVTKTEIGEVLLVGGMSRMPKVQQTVQDLFGRAPSKSVNPDEA
VAIGAAIQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAA
DGQTQVEIKVCQGEREMAADNKVLGQFTLVGVPPAPRGVPQIEVTFDIDANGIVHVSAKD
KGTGREQQIVIQSSGGLSKDDIENMVKNAEKYAEEDRRRKERVEAVNMAEGIVHDTESKM
EEFKEQLPADECNKLKEEIAKVRELLARKDSETGENIKQAASTLQQASLKLFEMAYKKMA
SDREGSGGSSSTGTEEKKEGQQ
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgatgctcagtgcggccaggactgcctcccaaactctcctgctgacccgggcaggctgc
gcaaggagcggagcctctctcgccacgaacaagggatgttggaacggactgagtcaagat
gtcctcagaacagtatccagacgtgactatgcgtcagaagcaatcaaagggtcagtaata
ggcatcgatctgggaaccaccaactcctgcgtggcagtgatggaaggcaaacaggcaaag
gtcctggagaatgcagagggtgcccgcaccacgccctctgttgtggcgttcactgctgac
ggtgagaggctggtggggatgccagctaagcgccaggctgtcaccaaccccaacaacacc
ctgtacgccaccaagcgcctcattggacgccgctttgacgacgcagaagtgcagaaagac
cttaagaacgtaccctataagatagtccgcgcttctaacggagacgcctgggtggaggcc
catgggaagatgtactcccccagccaggtgggtgccttcgtcctcatgaagatgaaagag
acagcagaaagctacatgggtcacagtgtgaagaatgctgtggtgacggtccctgcttac
ttcaatgactcccagcgacaggccaccaaggatgctggccagatctccgggctcaacgtg
ctgcgtgtcatcaatgagcccacggctgctgctctggcctacgggctggataagtcccag
gacaaaatcatcgctgtgtatgatctgggaggtgggaccttcgatatctcgatcctggag
atccagaagggtgtgttcgaggtcaagtccaccaacggagacaccttcctgggaggggag
gactttgaccaggccctgctgagacacatcgtcaaggagttcaagagagagtccggtgtt
gacctcaccaaggacaacatggccttgcagagagtccgggaggctgctgagaaagccaag
tgtgagctgtcctcctccctgcagactgacatcaacctgccctacctgacgatggacgcc
tcgggtcccaagcacttgaacatgaagctgacccgctcgcagttcgagggcatcgtgggc
gatctgatccgcaggactgtggctccctgccagaaagccatgcaggacgccgaagtcacc
aagaccgagatcggggaggtgctgctggtcgggggcatgtcccgcatgccaaaggtgcag
cagacagtgcaggacctgtttggacgcgcccccagcaagtctgtgaaccccgacgaggcc
gtggccatcggagccgccatccaggggggcgtgctggccggggacgtgacggacgtgctg
ctcctggacgtcacccccctgtccctgggcatcgagacccttgggggggtcttcaccaag
ctcatcaaccgcaacaccaccatccccaccaagaagagccaggtgttctccacggcagct
gatggacagacgcaggtggagatcaaggtgtgccagggagagagagagatggcagcagac
aacaaggtcttggggcagttcactctggttggggtcccccctgcaccccgcggagtcccc
cagatcgaggtgacctttgacatcgacgccaacgggatcgtccacgtgtcggccaaggac
aagggcaccggccgcgagcagcagattgtaatccagtcatctggcggcctcagcaaagat
gacatcgagaacatggtgaagaatgcagagaagtacgctgaggaggacaggaggagaaag
gagcgtgtcgaagctgtgaacatggccgagggaatcgttcacgacacagaatctaagatg
gaggagttcaaggaacagctccctgccgatgagtgcaacaaactgaaagaagagatcgcc
aaagtgagagagctgctggccagaaaggactcagagactggtgaaaacatcaagcaggct
gcgagcaccttgcagcaggcctcactcaaactcttcgagatggcctacaagaagatggcg
tctgatcgggagggcagtggtggcagcagcagtactggcactgaagagaagaaggagggg
cagcagtag
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