Polyodon spathula (Mississippi paddlefish): 121297053
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Entry
121297053 CDS
T07273
Name
(RefSeq) ubiquitin-protein ligase E3B-like
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121297053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121297053
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121297053
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
HECT type E3
121297053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
121297053
NCBI-ProteinID:
XP_041078998
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All DBs
Position
22:26816320..26833028
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AA seq
734 aa
AA seq
DB search
MIESEITPRMSGILGNSGQSHHPSAQDYRLLTSDPSQLSEDNLPSDLQSLSWLTSVDVPR
LQQMATGRLDFSMNSQNSMLEQQTAQMNNMNVAGGQGAMIHIQSSMQSSLMGMNTMATHS
GNMTPYSMSGQLSPSYQQQHTLYQPTSQQVYTLSQTSQQCSPVGLYSNISYGTQTQFSQP
RLAPHNQDLQPKSYPKPIYSYSVNRCRILDDIEVYEEQISFKTEELVTISSFLNTFVYKM
IWDGILENAKGETLDLFHSVHGWLMVLYERDCRRRFAPDDHWLRKDLKPSLLFQELDKGK
RRAQLLLQYIPHVIPHKNRVLLFRNIVTKEKESLGLVETNSASPHVTHITIRRSRMLEDG
YDQLRRLPINSIKGVIRVKFVNDLGVDEAGIDQDGVFKEFLEEIIKKVFNPALNLFRTTS
GDERLYPSPTSYIHENHLQLFEFVGKMLGKAIYEGIVVDVPFASFFLSQVLGHHHSTFYS
SIDELPSLDSEFYKNLTSIKRYDGDVGDLGLTLSYDEDVMGQLVCHELIPGGKTTLVTNE
NKISYIHLMAHFRMHTQIKEPTTAFIRGFRCIINPEWLHVFSTPEVQRLISGDNAEIDLE
DLKKHTVYYGGFHSSHRVIIWLWDIMANDFTSEERAMFLKFVTSCSRPPLLGFAYLKPPF
SIRCVEVSDDQDTGDTLGSVLRGFFTIRKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDK
LRYAISMNTGFELS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaagcgaaatcacacccagaatgtcaggaattcttggaaattcaggacaaagt
catcacccttcagcccaggactacaggctgctaacctccgacccctcccagctgagcgag
gacaacctccccagtgacctgcagtccctctcctggctgacctctgtggacgtgccccgg
ctacagcagatggcaacagggcgccttgacttcagcatgaactcccagaattccatgctg
gagcagcaaacagcccagatgaacaacatgaatgtagctggaggacagggtgccatgatt
cacattcagagcagcatgcagagcagcctcatgggaatgaacaccatggcaacccacagt
ggtaatatgactccgtactctatgagtggacagctatcccctagctaccagcaacagcac
acgctataccagcctactagccagcaagtctacaccctctcacagaccagccagcagtgc
tctccagttggtctctacagcaacatctcatacgggacccaaacccagttcagccagcct
cgcctcgcccctcacaaccaggacctgcagcccaaatcctaccccaaacccatctactct
tacagtgtgaatcgttgcaggatcctggatgacatagaggtgtatgaagagcagatttcc
tttaaaacagaagagctggtcaccatctcctccttcctcaacacctttgtgtataagatg
atttgggacggaatcctggagaatgcgaaaggggagaccctggatctcttccactcagtt
cacggctggctgatggtgctgtacgagcgggactgccgccggaggtttgcaccagatgat
cactggctgcgcaaagacctgaagcccagcctcctgttccaggagttagataagggaaag
aggagagcccagctcttactgcagtacatcccacatgtcattcctcataaaaacagagtc
ctgctgttccgtaacattgtaacaaaggagaaggagtctctgggattggtggagacaaat
tcggcctcgcctcacgtcacccacattaccatccggcgctctcgcatgctggaggacggc
tatgatcagctgcgccggctgcccatcaactccatcaagggtgtgatccgggtgaagttc
gtgaacgacctgggggtggacgaggctggcatcgaccaggacggagtctttaaggagttt
ctagaggagatcatcaagaaagtgtttaaccctgccctcaacctcttcaggacgaccagc
ggggatgaaagactctacccctcgcccacctcctacatccacgagaatcacctgcagctt
tttgagttcgtgggcaagatgctggggaaagccatctacgaggggatcgtggtggacgtg
ccttttgcttcctttttcttgagccaagtcctcggacaccatcacagcaccttctacagc
tccatcgatgagctgccatcactggactccgagttttacaagaacctcacgtcgattaag
cgctatgacggggacgttggtgaccttggtctgaccttgtcttacgatgaagatgtcatg
gggcagctggtttgccatgagctaattccaggaggaaagaccacgctggttaccaatgag
aacaagatcagctacatccatctgatggctcacttccgaatgcacacgcagattaaagag
ccaaccacggcctttatccgaggcttccgctgcatcatcaaccccgagtggctgcatgtg
ttctccacgcccgaggtgcagaggctcatctccggggacaacgcagagatcgacctggag
gacctcaaaaagcacactgtgtactacggcggttttcacagcagtcatcgggtgattatc
tggctttgggacattatggcgaacgacttcacttctgaagagagagccatgtttctcaag
tttgtcaccagttgctccagacctccactcctgggtttcgcctacctcaagccccccttc
tctatccgctgtgtggaggtgtccgatgatcaggacacaggagacacgctgggcagtgtc
cttaggggtttcttcaccatccgcaagaaggagccaggagggcggctccccacctcctcc
acctgctttaacctgctcaagctgcctaactacagcaagaaaagcatcctgcgggacaaa
ctgcgctacgccatcagcatgaacacaggcttcgagctgtcctag
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