Polyodon spathula (Mississippi paddlefish): 121297090
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Entry
121297090 CDS
T07273
Name
(RefSeq) RING finger protein 145-like
KO
K23789
E3 ubiquitin-protein ligase RNF145 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121297090
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121297090
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121297090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRC8_N
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-RING_11
zf-ANAPC11
Prok-RING_4
zf-P11
RINGv
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
121297090
NCBI-ProteinID:
XP_041079050
LinkDB
All DBs
Position
22:6333876..6350936
Genome browser
AA seq
749 aa
AA seq
DB search
MAVKDNLKAVLNVGLRVPSIMLLDVLYRWDVSSFFQQIQKSTLNNNPLFQYKYLALNMHY
VGYILSVVLLTLPRQQLVQLYLYVLAALLLFAGHQISRDYVRNELESEYDGPVYLEPLTM
NRFTTALIGQLVVCTLCSCVMRTKQIWLFSAHLLPLVARLCLVPLETIVFINRFAMIFTG
LEVLYFLASNLLVPFNLAKTAYRELAQVVEVYGLLALGMSLWNQLVVPVLFMVFWLVLFA
LQIYSYLSTRDQPTSRGRLLFFFLTSIAECCSTPYSLLGLVFTVSFLALGVLTLCKFYLQ
GYRAFMNDNTMNRGMTEGITLLILAVQTGLIELQVIHRAFLLSIILFIVVASILQSMLEI
ADPIVLALGASRDKSLWKHFRAVSLCLFLLVFPTYMAYMICQFFHMDFWLLIIISSSILT
SLQVLGTLLIYVLFMVEEFRKEPVENMDDVIYYVNGTYRLLEFLVALCVVVYGVSETIFG
EWTVMGSTIIFIHSYYNVWLRAHLGWQNFLLRRDAVNKIKCLPMATDEQLEKHNDICAIC
YQDMKSAVITPCSHFFHAGCLKKWLYVQETCPLCHSQLKSQSQQATTAAPPPGAVQPPAQ
EAPENQERAVQENPPPEEQGSQGTPLQDGSGSSCRDSPGEGQSGGSSSAVLKSPDIQEQP
KLECQGSSLDGLTASQARRQEAYSSSSPHCSAGSNDSESLNTHSSVGVLKENRGDSEAPS
HHIAGCLQDSPGIPEQEVGRLAESTQKLK
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgaaagataacctcaaagctgtgctgaacgtgggcctgcgggtgcccagcatc
atgctcttggatgttctctaccgatgggacgtgagctccttcttccagcagatccagaaa
agcaccctcaacaacaaccccctcttccaatacaaatacttggcgctcaacatgcactat
gtgggttatatattaagcgtagttctcctgacgttgcctcggcaacagctggtccagctc
tacctgtatgttctcgccgcattgctcctgttcgccggccatcagatctctagagattat
gtgcggaacgaactagaatctgaatatgatggtccagtatacctagagcctcttacaatg
aatcgctttacaactgctcttattggtcagctggtggtttgcactctctgctcttgcgtc
atgcgcaccaaacagatctggctgttctccgcccacctgctgcctctggtggcgcgtctc
tgtctggtgcccctggaaaccatcgtcttcatcaaccgctttgccatgatcttcaccggc
ctcgaggtgctctacttcctggcctccaacctgttggtccccttcaacctggccaagact
gcgtacagagagctggctcaggtggtggaggtgtacggtctcctggcacttggcatgtcc
ctgtggaatcagctggtggtgccggtcctgttcatggtcttctggctggttctgttcgct
ctgcagatctactcctacctcagcaccagggaccagcccacctccagagggaggcttctc
ttcttctttctcacaagcattgcagagtgctgcagcaccccctactctctgctgggtttg
gtgttcactgtctccttcttggctctgggcgtcctcaccctctgcaagttttacctgcag
ggataccgtgccttcatgaacgacaacacaatgaacagggggatgacggagggaatcacg
ttgctgatcctggctgtacagacagggctgattgagctgcaggtgattcaccgagcattc
ctcctcagcatcattctcttcatcgtagtggcctccatcctgcagtccatgctggagatt
gctgaccccatcgtcctcgcactgggagcctctcgagacaagagcctgtggaagcacttc
cgtgcagtgagcctctgtctcttcctcctggtgtttccaacctacatggcctacatgatc
tgccagttcttccacatggatttttggcttctcatcatcatctcaagcagtattctcacc
tccctgcaggtgctgggcacactcttaatctacgtgctgtttatggtggaggagttccgc
aaagagccagtggagaacatggatgatgtcatctactacgtaaacggcacctaccggctg
ctggagttcctagtggcactttgcgtggtggtctacggtgtctcggagaccatctttggg
gagtggactgtcatggggtccaccatcatcttcatccactcctactacaacgtgtggttg
cgagctcacctgggctggcagaacttcctgctgcgccgcgacgccgtcaataagatcaaa
tgcctgcccatggccactgacgagcaactcgagaaacacaacgatatctgtgccatctgt
taccaggatatgaagtcagcagtgatcaccccatgcagtcatttcttccacgctggctgc
ctcaagaaatggctgtatgtccaggagacctgccctctttgtcacagccaactaaaaagc
caatcgcagcaagccacgacagctgcacctcctccgggggctgtgcagcccccagcacag
gaagcccctgagaaccaggagagggctgtgcaggagaaccctccaccggaagagcagggg
agccaggggacacccctacaagacgggtctggctccagctgcagagactcaccaggggag
gggcaatctgggggttcaagcagcgctgtgctgaaatctccagatatccaggagcagccc
aaactggaatgccaaggcagtagtctagatgggctaacagccagccaagccagaagacag
gaggcttacagttcttcatctccacactgctctgctggatcgaatgattcagaaagcctg
aatacacattccagtgtaggggttttaaaggagaatcggggagactctgaggcacccagt
catcacattgctggatgtttacaggattccccagggataccagaacaggaggttgggagg
cttgcagaatctacccagaagttgaaatga
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