KEGG   Polyodon spathula (Mississippi paddlefish): 121297128
Entry
121297128         CDS       T07273                                 
Name
(RefSeq) F-box/WD repeat-containing protein 11-like isoform X1
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04114  Oocyte meiosis
pspa04120  Ubiquitin mediated proteolysis
pspa04218  Cellular senescence
pspa04310  Wnt signaling pathway
pspa04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121297128
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    121297128
   04340 Hedgehog signaling pathway
    121297128
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    121297128
   04218 Cellular senescence
    121297128
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pspa04121]
    121297128
   03036 Chromosome and associated proteins [BR:pspa03036]
    121297128
Ubiquitin system [BR:pspa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     121297128
Chromosome and associated proteins [BR:pspa03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     121297128
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_C WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-TrCP_D Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_EML WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 F-box-like Beta-prop_SPT8 Beta-prop_IP5PC_F Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_IFT122_1st NBCH_WD40 WD40_like Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_HPS5 F-box Beta-prop_WDR11_2nd Beta-prop_Nup120_160 Beta-prop_WDR19_1st Beta-prop_VPS8 WD40_RFWD3 PEP5_VPS11_N WD40_2 DUF1513 DUF4508
Other DBs
NCBI-GeneID: 121297128
NCBI-ProteinID: XP_041079126
LinkDB
Position
22:complement(7851844..7878430)
AA seq 565 aa
MEPEIEDKTLELMCSVPRSLWLGCSHLAESMCALRCLQSMPSVRCLQNTSVMEAQNEDDS
PKKSTVFQISNGPSSVIVSRKRPSEGNYEKEKDVCIKFFDQWSESDQVEFVEHLISHMCH
YQHGHINTYLKPMLQRDFITALPAQGLDHIAENILSFLDARSLCAAELVCKEWQRVISEG
MLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNRTTEIPPNSYYRSLYPKIIQDIETIEA
NWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKQTLECLKILTGHTG
SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRS
IAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNG
HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAY
DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLN
VASSMAPNGQNEGRSPSRTYTYISR
NT seq 1698 nt   +upstreamnt  +downstreamnt
atggagcccgagatcgaggataaaacactggagttaatgtgttctgtgcccaggtctttg
tggctaggctgctcccacctggcagagagcatgtgtgcactgaggtgcctgcagagcatg
cccagtgtccggtgtcttcagaatacttctgtaatggaggcacagaatgaagacgactcc
cccaaaaagagcacagtgttccagatcagtaacggtccctcctctgtgattgtgtcacgg
aaacggccctcggaggggaactacgagaaggagaaggacgtctgcatcaaatttttcgac
cagtggtcagagtcggaccaggttgagtttgtggagcacctcatctcccacatgtgccac
taccagcatggacacataaacacctacctgaaacccatgctgcagcgggacttcatcact
gccctgccagcccagggcctggatcacattgcagagaacatcctgtcattcttggatgct
cggtcactgtgtgcagcagagctggtgtgtaaagagtggcagcgtgtcatctcggagggt
atgctgtggaagaagctcattgagaggatggtgcgcactgacccgctgtggaaggggctg
tccgagaggcaccagtgggagaagtaccttttcaaaaacagaacgactgagatcccacca
aactcttactacaggtcgctgtacccaaagatcattcaggatattgagacgatcgaagca
aactggcggtgtggacgccacaacctgcagcggatccagtgccgctcagagaacagcaaa
ggggtgtactgcctgcagtacgatgatgacaagatcatcagtggcctgagggataactcc
atcaagatctgggacaagcagaccctggagtgtctgaagatcctgacaggccacacgggc
tctgtgctgtgtctgcagtatgatgagagagtcattgttacaggctcctcagattccaca
gtgcgggtgtgggatgtaaacactggggaggttctcaacacgctaatccaccacaatgaa
gcagtgcttcacctgcgcttctgtaacgggctgatggtgacctgctccaaggaccggtcg
atcgcggtgtgggacatggcttccccaactgacatcagcctgcgcagagtcctggtgggc
caccgtgcggcagtcaacgttgtcgacttcgatgacaaatacatagtctctgcctctggg
gaccggaccataaaggtgtggagcacaagcacgtgtgaatttgtgcgcactctgaacgga
cacaagcgcggcattgcatgtcttcagtaccgggaccggctagtggtgagcgggtcctcg
gacaacacaatccggctgtgggacattgagtgtggtgcctgtctacgagttctggagggc
catgaagagctggtccgctgtatccgatttgacaacaagaggatagtcagcggagcctat
gacggaaaaattaaggtgtgggacctgcaggctgctctggatccccgtgccccagccagc
actctttgtctgcgcacccttgtggagcattctggccgggtcttcaggctgcagtttgac
gagttccagatcatcagtagttctcatgacgacacaatcctgatctgggacttcctcaac
gtggcatcaagcatggctcccaacggacagaacgaggggcgctctccgtcccgcacctat
acctacatctctagataa

DBGET integrated database retrieval system