Polyodon spathula (Mississippi paddlefish): 121297173
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Entry
121297173 CDS
T07273
Name
(RefSeq) vascular endothelial growth factor receptor 3-like
KO
K05097
FMS-like tyrosine kinase 4 [EC:
2.7.10.1
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04020
Calcium signaling pathway
pspa04510
Focal adhesion
pspa04518
Integrin signaling
pspa04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121297173
04020 Calcium signaling pathway
121297173
09133 Signaling molecules and interaction
04518 Integrin signaling
121297173
04519 Cadherin signaling
121297173
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121297173
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pspa01001
]
121297173
Enzymes [BR:
pspa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121297173
Protein kinases [BR:
pspa01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
121297173
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
Ig_VEGFR-1-like_5th
I-set
VEGFR1-3_N_Ig-like
Pkinase
Ig_2
ig
VEGFR-2_TMD
VEGFR-1-like_Ig-like
V-set
Ig_6
C2-set_2
Haspin_kinase
GRXCR1-2_C
ABC1
Motif
Other DBs
NCBI-GeneID:
121297173
NCBI-ProteinID:
XP_041079211
LinkDB
All DBs
Position
22:complement(1853725..1900035)
Genome browser
AA seq
1395 aa
AA seq
DB search
MKRDFTCFFRIWIVITCISGQVLGYSMTPPTLDSPEDELVINSNDTLNITCRGQHSLDWA
WPGKRGLSKQEEKDRQDQLSPTELPGSQHSLSTRECQGKPGKPYCKTLVLTGALANDTGY
YRCFYQDIKAVIDGTTAASTYVFVRDLLQPFIKGEHSQPGVLIITKRTHIEVPCRVSVPD
LNVTLLRYENSHFVPLDRKLMSWNNKRGMSVPREMVLSNSGLSGVICHTEINKVQFRSAF
FFSHISGSHIYDFKLFPAEWVELAVGEGLVLNCTALVEFNTGVEFQWAYPGKQANRTVSI
RSERNSLDQQTEVSSMFFIPSVNLTDVGTYTCTASNGEKSFQASTQVIVHEKLFISMEYV
SGPVVEATAGQRIVKLPVKVSAYPLPEIQWYKDGKVITKSPEFNRMKQWHYVLEIREVSQ
LDAGNYTVVLRNSAACLERGLSLYLVINVPPRIHEKEVASPTNIYPRGSRQTLTCTAYGV
PAPSSVTWQWRPWGPCGLNSTQSLGRRGAIKRRPRDRVPECQNWQDVETENGVNKIESLD
TWTEIVDGRNKTVSKLVIVSANVSVVYKCSVANKVGRDERLIYFYVTTIPEGFGIELHPS
EEPVERELVSLRCSADNYTYENLQWYRLDPRTLRDDNGSPLVLDCKSVHLYADPLDGELS
FEPASNNWVLELTIPHILLHEEGDYVCEVQNRRSREKHCHRKYITVQAQEAPRLRQNLTN
QTVNVSESMLMKCEVEGTPSPQISWFKDEKPLYKMSGIVLQDSNQTLSIQRVREEDAGLY
TCNACNEKGCVRMSATISVEGSDDRTNVEIVILIGTGIIAVFFWILLILIFCNAKRANPA
DIKTGYLSIIMDPGEVPLDEQCEYLPYDSTQWELPRDRLRLGKVLGHGAFGKVVEASAFG
INKMNSLNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKSNGPLMVI
VEYCKYGNLSNYLRAKREGFLPYRDRSPKMRSQVRSMMEAVMVESSSRAGPSESSVMARI
IANQNQNFRPSLQKVEDLWKTPLTVEDLICYSFQVARGMEFLASRKCIHRDLAARNILLS
ENNVVKICDFGLARDIYKDPDYVRKGNARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWE
IFSLGASPYPGVQIDEEFCQRLKDGTRMRAPENTSPEIYRIMLACWQGEPRERPTFSVLV
EILGDLLQENMLQEGKDYIPLNTSQSSEDDGFSQASSRPSSQEEESELRLHCDVMPGRYY
NCVSFGGSRGTPLRCQGRVKTFEEYPLEQTSHKAHHDNQTDSGMVLPSEEFQRIEHKHRG
ALALSQQVSRSTEGPAGSTEQTSRYRPPFQSQQSGQTFYNNEYGQLSQGTLGDFFSTAAG
GGGDSEPGCIAASSL
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagattttacgtgtttcttccgtatttggattgtgatcacttgcatatcaggt
caggtgcttgggtattctatgactccacccactcttgacagcccagaagacgagcttgtg
attaactccaatgacacactgaacattacatgcaggggacagcactctctggattgggcc
tggcccggtaaacggggcctcagcaaacaggaagagaaggatcgtcaagaccagctgtcc
cccacagagctgccagggagccagcactcgctgtccacccgggagtgccagggcaagcca
gggaaaccatactgcaaaaccctggtgctgactggagccctcgccaacgacaccgggtac
taccgctgcttctaccaggacatcaaggcggttatcgacggcaccactgctgccagcacg
tatgtcttcgtcagagatctgcttcagcccttcattaaaggagagcacagccagccgggg
gtcctcattatcaccaagaggacacatatcgaggtgccgtgccgggtgtctgtcccagac
ctgaacgtcactctcctccgctatgagaacagtcattttgtcccactggacagaaagttg
atgtcgtggaacaacaagagaggcatgtctgtccccagggagatggtcctcagcaactcc
ggtctctcgggggtgatctgccacactgagatcaacaaggtccagtttcgctccgccttc
ttcttctcccacatttcaggaagccatatttatgatttcaagctgtttcctgctgagtgg
gtggaacttgcggtgggggaggggcttgtcctgaactgcacggcgttggtggagtttaac
acgggcgtggagtttcagtgggcctatcctggcaaacaggctaaccgcacagtgagtatc
cgttccgagaggaattccctggatcagcagacggaggtctccagcatgttcttcattccc
agtgtgaatctgactgacgtgggaacgtacacctgcactgccagcaatggggagaagagc
ttccaggcctccacgcaggtcatcgtacatgaaaagctgttcatcagcatggagtacgtg
agcggacctgtggtagaggccacagctggacaaaggattgttaaactccctgtcaaagtg
tctgcttacccgttacctgaaatacaatggtacaaggatggcaaggtaattaccaagagc
ccagagttcaacaggatgaagcagtggcactatgtgttggagatccgcgaggtgtcacag
ctggatgcaggaaactacaccgtggtcctgagaaacagcgctgcctgcctggaaaggggg
ctcagcctctaccttgtcatcaacgtgccaccgaggatccatgagaaggaggttgcctct
cccaccaacatctacccccggggcagccggcagaccctgacctgcaccgcctatggggtc
ccagctccgagctccgtcacctggcagtggagaccgtggggcccctgcggactgaacagc
acgcagagcctgggccgtcgaggagccatcaagcgccggccaagggaccgggtgccagag
tgtcagaactggcaggacgtggagacggagaatggagtgaataagatcgagagcctcgac
acctggacggagatcgtggatggcaggaacaaaactgtgagcaagctggttatagtgagt
gccaatgtctcagtggtgtacaagtgctccgtcgccaacaaagtggggcgagacgagagg
ctcatctacttctacgtgaccactatcccggaaggcttcgggatcgagctgcatccctcg
gaggagccagtggagcgggagctggtgagcctgcggtgcagtgctgacaactacacttac
gagaacctgcagtggtaccggctggacccccgcacgctgcgggacgacaacggcagcccc
ctggttctggactgcaagagcgtgcacctgtacgcagaccccttagacggggagctctcc
ttcgaacctgcctccaacaactgggtccttgagctcaccatcccccacatcctgctgcac
gaggagggagactacgtgtgcgaggtgcagaaccgcaggagcagagagaagcactgtcac
cgcaagtacatcaccgtgcaagcccaggaagctccgcggctccggcagaacctgaccaat
cagacggtgaacgtgagcgagtccatgctgatgaagtgcgaggtggagggcaccccctcg
ccccagatctcctggttcaaagacgagaagcctctctacaaaatgtcagggatcgtgctc
caggactccaaccagaccctgagtatccagagggtgcgtgaggaggacgccggcctgtac
acctgcaatgcctgtaacgagaagggctgcgtgcgcatgtcagcaaccatctctgtcgag
ggctcagacgaccggaccaatgtggagatcgtgatcctgatcgggaccggaatcattgcc
gtcttcttctggatcctgctcatcctcatcttctgtaacgccaagcgggctaacccggca
gacatcaagacgggctacctgtcgatcatcatggaccccggggaggtgcccctggatgag
cagtgcgagtatctgccctatgactctacccagtgggagctccctcgggacaggctgcgg
ctcgggaaggttcttgggcacggggccttcgggaaggtggtggaggcctctgctttcggg
atcaacaaaatgaacagcctcaacacggtcgcggtcaagatgctgaaagagggagccaca
gccagtgagcacaaagcactgatgtcagagctgaagattctcattcatatcgggaaccat
ctgaacgttgtgaacctgctgggagcctgcaccaaatccaacggccccctgatggtgata
gtggagtactgcaagtatgggaatctgtccaactacctgcgcgccaagagggagggattc
ctgccttacagggaccgctccccaaagatgcgcagtcaggtgcgctccatgatggaggct
gtgatggtggagagtagcagccgggccgggcccagcgagagctctgtcatggcccgtatc
atcgccaaccagaaccagaactttagacccagcctccaaaaagtggaagacctctggaag
accccgttgaccgtggaggatctgatctgttacagcttccaagtggcgcgaggcatggag
ttcctggcctcccgcaagtgcattcacagggacctggctgcccgcaatatcctgctgtcc
gagaacaacgtagtgaagatctgtgatttcggactggcccgggatatttacaaggacccc
gactacgtgcgaaaggggaatgctcgcctgcccctgaagtggatggctccagagagtatt
tttgacaaggtgtacacgacgcagagcgacgtgtggtccttcggggtcctgctgtgggag
atattctcattgggtgcctccccatacccaggggtgcagattgatgaggagttctgtcag
aggctcaaagatgggacgcggatgcgagcgccggagaacacctctcccgaaatatatcgg
atcatgctggcctgctggcagggcgagcccagggagagacccaccttctcagtgctggtg
gagatcctcggagacctgctgcaggagaacatgctccaggaagggaaggactacatccct
ctcaacacgtctcagagctcggaggacgacggcttctcccaggcctcctcccggccctcc
tcccaagaggaggagagtgaactgaggctgcactgcgatgtgatgcctggcagatactac
aactgcgtgtcatttggtgggagcagggggactcctctgaggtgccaggggcgggtcaag
accttcgaggagtacccgctggagcagacctctcacaaggcacaccatgataaccagacg
gacagcgggatggtgctgccctccgaggagtttcagagaatcgagcacaaacacagagga
gccctggcactcagtcagcaggtgagcagaagcacagaggggcccgctggctccacagag
cagacgagccggtatcgaccgcccttccagagccagcagtccggacagaccttctacaac
aacgagtacggccagctttcccagggcacgctgggggacttcttctccacggcagcagga
ggagggggggactctgagccaggctgcattgctgcctccagcctctag
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integrated database retrieval system
