Polyodon spathula (Mississippi paddlefish): 121297175
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Entry
121297175 CDS
T07273
Name
(RefSeq) beta-1,4-galactosyltransferase 7-like
KO
K00733
xylosylprotein 4-beta-galactosyltransferase [EC:
2.4.1.133
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pspa00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
pspa01100
Metabolic pathways
Module
pspa_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
121297175
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
121297175
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pspa01003
]
121297175
Enzymes [BR:
pspa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.133 xylosylprotein 4-beta-galactosyltransferase
121297175
Glycosyltransferases [BR:
pspa01003
]
Glycan extension
O-Glycan
121297175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7C
Glyco_transf_7N
CHGN
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
121297175
NCBI-ProteinID:
XP_041079215
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All DBs
Position
22:1282756..1288646
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AA seq
324 aa
AA seq
DB search
MMYSFRRKPVLYFKEENRSRLFFGVLSRKCSIFKLFCVCMVIGFASLLWLQLSCSGEVPR
RVVEDGTLSRQPCLPERQASATDDPSWGPHKLALLIPFRERFEELMVFVPYMHSFLNKLK
VRHKIFVINQVDHYRFNRASLINAGFLESGNDTDYIAMHDVDLLPLNENLDYGFPDQGPF
HIASPELHPLYHYKTYVGGILLLTKQHYQMCNGMSNRFWGWGREDDEFYRRLKAAGLQLF
RPTGITTGYKTFRHLHDPAWRKRDQKRVASQKQEQFKVDREGGLSKLRYSVDSKRELTIS
GAPCTLINILLDCDLNDTPWCLLS
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgatgtactcgttcagaagaaaacctgtgctttatttcaaggaggaaaaccggtcccgt
ctgtttttcggtgtcctgtccagaaagtgctccatcttcaagctcttctgtgtgtgcatg
gtgatcggctttgcctctctgctgtggctccagctcagctgctctggcgaggtgcccagg
agggttgttgaggatggcaccctgtcacgtcagccctgcctcccagagagacaggcgagc
gcaacagacgacccttcctggggtcctcacaaactggccctcctcatccctttcagagag
cgctttgaggagctcatggtctttgtgccctacatgcactccttcttaaacaagctgaaa
gtacgacacaagatctttgtgatcaaccaggtagatcattacagattcaaccgagcttcc
ctgataaacgctggatttctggagagtgggaacgacactgattacattgccatgcatgat
gtggacttgctgcctctcaatgagaatttggactatggctttccagatcagggcccgttc
catatcgcgtctccagagctgcaccccctgtaccactacaagacatacgtgggggggatt
ctgctcctcaccaaacagcattaccaaatgtgcaacgggatgtcgaaccgcttctggggc
tggggcagagaggacgacgagttctacagaagattaaaagctgcagggctgcagctcttc
aggcctacgggaataacaacagggtacaagacgttccgacacctacacgacccggcatgg
aggaagagggaccagaagagagtggcctcacagaagcaggagcagttcaaagtggacaga
gaaggggggctgtccaagctgcgatacagtgtggactctaaaagggagctcacgatcagc
ggggctccgtgcacactgatcaatatcctgctggactgtgacctcaacgacaccccgtgg
tgcctgctgagctga
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