Polyodon spathula (Mississippi paddlefish): 121297194
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Entry
121297194 CDS
T07273
Name
(RefSeq) nuclear receptor corepressor 2-like isoform X1
KO
K06065
nuclear receptor co-repressor 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121297194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121297194
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
121297194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
DnaT
Motif
Other DBs
NCBI-GeneID:
121297194
NCBI-ProteinID:
XP_041079254
LinkDB
All DBs
Position
22:25556413..25684229
Genome browser
AA seq
2477 aa
AA seq
DB search
MSRPTQPVPQNRRPVDSRHHPNPLPIPMQLARAHTDVGIADYHHHSRDYNSHMSHGAMSQ
PYRRRPSLLSEFQPGSERGQDQHLRYEQIGYITESNSQSEAEYAEAKRPRLELAAESLMR
HPAHLSSSQLGGAEDVSKERGGGIGKLEPVSPVSPAQLEGELDLVPARFSKEELIQNMDR
VDREITMVEQQISKLRKKQQQFEEEVAKPQEPEQPISPPPSEAKHRSLVQIIYDENRKKA
EEAHRILEGLGPRVELPLYNQPSDTKQYHENIKINQAMRKKLILYFKRRNHARKQWEQKF
CQRYDQLMEAWEKKVDRIENNPRRRAKDSKVREYYEKQFPEIRKQRELQERMQSRVGQRS
GGLSTSAARSEHEVSEIIDGISEQENSEKQMRHLAVIPPMLFDAEQQRIKFINMNGLMDD
PMKVYKDRQVMNMWSEQEKETFREKFIQHPKNFSLIASFLERKTVADCVLFYYITKKNEN
YKNIVRRNYRRRGRSQQQQQQQQHQPQQVGRSSQEEKDEKEKEGEKEEEKAELDNDKDDP
LKDRSGDTSGEEGEDKEPTVAFKGRRTANSQGRRKGRITRSMANENEEAATPPLNNELAN
LEMNESSRWTEEEMDTAKKGLLQHGRNWSAIAKMVGSKTVSQCKNFYFNYKKRQKLDEIL
QQHKMKVEKERNARRKKKNAAAVQSEEAPSVTEEEEMEVSGASGNEEEMAEDAEGAANNS
SDTESLSSPRSSEDSKTKDNNNEGNRPKSAPGAVVENSAGPSAGSDDTAAGEPHRIPDKA
CAQSSKPKEQNKVKVEVEETLKEDLIKSEASEDSKEQQSDSTDKKPAVDIEAGKRTAKAM
KVENQHGHKAGANTDSDSSATCSADEVEEPDTSDKNRMTSPRPSLLNYSHDSVINSPLQK
PMDLKQLKQRAAAIPPIMPEVSLQGAPRSGKPQAPHHALALYQQQITMVHESVQENKAAI
KQQQQQQAEREKQLSNSPRIKTRSPAAPSDREEISDNERWLQTLLHGFHKQSAYSPEGRK
QSGERDSRPTSLSRPTHSPYQHSPREMSKVSSHPEPHLLHYNQGYQTAAHKMPINLQQDS
GGLAAVRPLQIPNPPPLISSTKPPGMLERPGGSITQGTPVQLHSSGYVSEHGKDSAGSLT
LGMPWMDHKKIVPFPAVKQEQLSPHSQAIQSESMLAQGAAHESSIIRGSSISAVQGGSIT
KGIPGTRIPQEAPMTYRGSITQGTPAEVLYKGTIARIITEDSPNRAERVREEALSKGHVI
YEGKIGHILSYDGAGQNSKEESRGPSAPPETTGGKRSYDMMEGGISRGLPVRDSLSVNCE
GLIGRAMPQDRHSPHHYKDAHHIRGSISQGIPRHMEPMEDYLRRDGKQLKRENTPPRGPP
PEALKGRHEVATVKEPGRSIHEIPREEMRHIPEVSIVTKPAKEGSITQGTPMKHDSGSSK
RHDVRSIIGNPSRYHPMQHHLEMLQDARVRYEESLKGRPSAVVSTSGSISRGSPVIITEP
SKAHHSPLAYEDHKATHRATFAGHPHRCSPVSSRESTARQHENSGMSSGKAQSQERKPTP
TPREVSANKSPHAGVPDHHASLASYEQLLRGVGAAELYRGQIPLTFDPASLPRGIPMEPA
YYLPRHLAPNHAYGHPYPPYLIRGFPETAALENRQTILNDYITSQQMHHAAAAAMAQRTD
LLRGLSPREQALALTYSAGPRGIIDLSQVPHLPVLVQSNAGASAPPMDRITYIPGAPSAY
GSRPYNTSPISPGGPSHMTKMPGTPSSERERERERERDRDRERDRDRDREREREKPTPSA
ANEKHAPIWRPGTEQSSGSSSSSSSHQPPTHSYSLQHSPVSPRTQDNIQQRPSVLHKTLP
LLTSESTTPSVLRSLSSAGSPAGRYTGYNPQLQRPITSAETYQPGMDPANVPKGDLGRGQ
EGGKAERHHSRASSNTMMPKHAQEHTASPAKTEPRTLIATLGAGYSSQYQPQQGRNHQIL
PHQHPHTLPSSDPAANEHPSRDNTQNKAVSVQEQELRALGKTTMTAANFINAIIMRQIPC
DKGKRERGSLAASAACDVQQKMSSESHLQHFRSVPEGYQSPGHPTQQQQQQQQQTSFKGH
QRVVTLAQHINEVITQDYTRLYPQQLNSQPQQQGYPYQSSPVLDLRRTPSEQLSQQQQES
GQSSRYTPDGAGMDRGRDRSPLQNKVSPMSGSGDGIEPISPAGGMSEPEQSQGLGCHGDQ
GDQVMGSRSPANNSQPPAFFSKLTESNSAIVKSKKQEMIKKMSAVSGNEPHFNTGQPGTE
IFNMPASTTAGPVNNRSHTTPEHSSNNIGLEAIIRKALMGKYDDQGEERAVAINTLAASA
SVPAAIPIAAADGRNEDIHSLAAGGKPKGSGRSNSRKSKSPGPGLSVGERPSSVSSVHSE
GDCNRQTPLTNRVWEDRPSSTGSTPFPCNPLTMQLPTGLVPASSTIQQGVASGPNRVWDE
EPKPLLCSQYETLSDSE
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atgtccagacctacgcagcctgtgccccaaaacaggaggccggtggacagccgtcaccac
cctaaccccctgcccatccccatgcagctggccagggctcacacggatgtaggaattgcg
gattaccatcatcattctagagactacaattctcacatgtctcatggggcaatgtcccag
ccttatagaagaagaccgtctttgttgtcagaatttcagccaggaagtgaaagaggtcag
gaccagcacctgaggtatgaacagattggatacatcactgagtcaaacagccaatcagaa
gccgagtatgctgaggccaaacgaccaaggttggagctggcagcagagtccttgatgcga
caccctgcccacctgtcctcttcccagctcgggggggcagaggatgtgtcaaaggagcgg
ggcggtgggattggtaaactcgagccagtctccccggtaagccctgcccagctggagggg
gagctggacctggtaccggcccgcttctccaaggaggaactgatccagaacatggacaga
gtggaccgcgagatcaccatggtggagcagcagatctccaaactcaggaagaagcagcaa
cagtttgaagaggaagtggccaaaccccaagaacctgagcagccgatttctcccccgcct
agtgaagccaagcatcgcagtctggtgcagatcatttacgacgaaaacaggaaaaaagca
gaggaggcccacaggatcttggagggactcggtccacgtgtggaactgcctctatacaac
cagccttcagacaccaagcaataccatgaaaatataaaaataaaccaggcaatgcggaag
aagctaattttatacttcaagaggagaaaccatgctcgtaaacagtgggaacagaagttc
tgccagcgctacgaccagctgatggaagcctgggaaaagaaagtggatcgcatcgagaac
aacccacggcggcgcgccaaggacagcaaagtgcgcgagtactacgagaaacagttcccc
gagatccgcaagcagagggagctgcaggagcgcatgcagagcagggtcggacagaggagt
ggaggcctctcgacatcggcggcgcggagcgaacacgaggtgtccgagatcattgacggc
atttcggagcaggagaactcagagaagcagatgcgtcacctggctgtcatcccacccatg
ctgttcgacgcagagcagcagcgaatcaaattcatcaacatgaacggcctcatggacgac
cctatgaaggtgtacaaggacagacaggtcatgaacatgtggagcgagcaggagaaggag
accttccgagagaagttcatccagcacccgaagaacttcagcttgatcgcttcgttcctg
gagagaaagactgtggctgactgcgtcctgttttactatattaccaagaaaaatgaaaat
tacaaaaacattgtgagaagaaactatcgccggcgcggaaggagccagcagcagcagcag
cagcagcagcaccagccacagcaagtgggccgcagcagccaggaagagaaggatgagaag
gagaaagagggagagaaggaggaggagaaagcggagctagacaacgacaaagatgaccct
ctaaaggacagaagcggggacacctcaggagaggaaggggaggacaaggagcccactgtc
gccttcaagggccgccggaccgccaacagccaagggcgacgcaaggggcgcatcactcgc
tcgatggccaatgagaacgaggaggccgccacgccaccgctcaacaacgaacttgctaat
ctggagatgaatgaaagctctcgctggacagaggaggaaatggatactgccaaaaaaggc
cttcttcagcatggcagaaattggtctgctattgccaaaatggtgggctccaaaactgtg
tctcagtgcaagaacttctactttaactacaagaagaggcagaaactggatgaaattctg
cagcaacacaaaatgaaagtggagaaggagcgcaacgcccgtcggaagaagaagaacgca
gcggcggtgcagagcgaggaggccccgtccgtgacagaggaggaggagatggaggtgtca
ggggccagcggcaacgaggaggagatggccgaggacgcagagggtgcagccaataatagc
tcagacacagaaagcctatcatctcccaggtcttcagaggacagcaaaaccaaagacaac
aacaatgaaggtaacaggcccaagtcagctcctggagctgtagtagaaaacagcgctgga
cccagtgctggatcagacgacactgctgcaggagagccccatagaattccagacaaggcc
tgtgctcagagcagcaagcctaaggagcagaacaaggtgaaagtggaagtcgaggagact
ctcaaagaagacctcattaagagtgaggcctctgaggactcaaaggagcagcaatcagac
tctacagataagaaaccagcagtggatattgaggcaggcaaaaggacagccaaggctatg
aaagtggaaaaccagcatggacacaaggctggtgcgaacacggacagtgactctagcgcc
acctgcagtgcagatgaagtagaggagccggatacctcagacaagaacaggatgacctcg
cctcggccaagcctgctgaattactcccacgacagtgtcataaactcgccgctgcagaag
ccgatggacctgaaacagctaaaacagcgggctgcagccattcctcccattatgcccgag
gtgtcccttcagggagcgccacgcagcggcaagcctcaggctcctcaccacgccttggcc
ttataccagcaacaaattacaatggtgcatgaatctgtgcaggagaataaggcagcgata
aagcagcagcagcagcaacaggctgaaagagagaaacagctgagcaacagccctcggatc
aaaaccaggagccctgcagcccccagcgacagagaagaaatcagtgataacgagagatgg
ctgcagactctgctacatggattccataaacaatctgcctactctccagaagggaggaag
caaagtggggagcgggattcgagacctaccagcctgtctaggcccacacactctccatac
cagcattctccaagagagatgtccaaagtctcctctcaccctgagcctcacctactgcat
tacaaccaaggttatcagacagcggctcacaaaatgccaataaacttgcagcaggacagc
ggtggactggcggcagttagacccctccaaatccccaacccccctccactcatctcgtca
accaaaccccccggcatgctggagaggccggggggctccatcacacagggcacacccgtt
cagcttcatagttcaggttatgtctctgaacatggaaaggactctgcaggttcgctcacc
ctggggatgccctggatggatcacaaaaaaattgtgccattccctgcagtgaaacaggag
cagctttcacctcacagtcaggcgatccagtcggagagcatgcttgcccaaggggctgcc
catgagagcagcattatcagggggtcctccatctctgcagtgcaagggggcagcattacc
aagggaatccctggcaccagaatccctcaggaggcaccaatgacctacagagggtccatc
actcagggcactccggcagaggtcctgtacaaaggtaccatcgcgaggataataactgaa
gacagtcccaacagagcagagcgagtgagagaggaggccttgagtaaaggacacgtcatc
tatgagggaaagatcggccacatactgtcctacgatggtgctggccagaactctaaagag
gaaagcagggggccgagtgccccccccgagacgacgggagggaagcgctcctatgacatg
atggaaggaggaatctccagagggttacctgtacgggactccctgtctgtcaactgtgaa
gggctgattggtcgagccatgccacaggaccgacacagtcctcaccactacaaggatgca
catcacatccggggatcaatctcacaaggtatacctcgccacatggagcccatggaggat
tatctccgaagagacggcaaacaattgaagagagagaacactcctcctcgaggcccgccc
cctgaggctctcaaaggaaggcatgaagttgccacggtgaaggagccaggcaggtccatt
cacgagatccctcgagaggagatgcggcacattccagaggtttccatagtgacaaagcct
gccaaagagggatccattacccagggcaccccaatgaaacacgacagcggttccagtaaa
aggcacgatgtgcgttcgatcatcgggaacccctcacggtaccacccgatgcagcaccac
ctggagatgctgcaggacgcgcgggttcgctatgaggagagcctcaagggccggcccagc
gcggtggtcagcacctcgggctccatctcccgcggctccccagtcatcatcactgagccg
agcaaggcccaccacagccccctggcctatgaggaccacaaggccacacacagggccacg
ttcgctgggcacccccaccgctgctctcctgtgtcgtcaagggaatccacagccaggcag
catgagaacagtgggatgagttcagggaaggctcagtctcaggagaggaagccaacgccc
accccaagggaggtgagcgccaacaagtccccccacgccggcgtcccggaccaccacgcc
tcactggcctcctacgagcagcttctgcggggcgtgggtgcagccgagctgtaccgtggg
cagatccccctgaccttcgatcctgcctccctgcccaggggcatcccaatggagccagcc
tactaccttcctcggcacctcgcccccaaccacgcctatgggcacccctaccccccctac
ctgatccgtgggttccccgagacggccgcactggaaaacagacagaccatcctcaacgat
tacatcacctctcagcagatgcaccacgccgcagctgccgcaatggcccagaggaccgac
ctgctgcgtgggctgtcgcctcgggaacaggccctggctctcacctattctgcaggcccg
aggggaatcattgacctgtctcaggttccacacttgcctgtcctggtgcagtctaatgct
ggtgcatcagcgccccctatggatcggatcacatacatccctggagcgccctctgcctac
gggagtaggccttacaacacctcccctatctcaccaggtgggccatctcacatgaccaaa
atgcctgggacaccttcatcagagcgcgaacgagaacgggaaagggagcgagacagggac
agggagagagacagggacagggacagggaaagggagagagagaagcctactccatctgct
gccaacgagaagcatgcccccatctggagacccggcacagagcagagcagcggcagcagc
agcagcagcagcagccaccaaccccccacacattcctacagcctccagcactccccagtc
tccccacgcacccaggacaacatccagcagaggcccagcgtgctgcacaagaccctcccc
ctgctcaccagcgagtccaccacaccctccgtgctcaggtccttgtcctcagccggctcc
ccagcaggcagatacactgggtataacccccagcttcagagacccatcacctcagcagag
acttaccagccaggcatggaccctgccaacgtgcccaagggggacttagggagggggcag
gagggaggcaaggcagagcgccaccacagcagggcgagcagcaacaccatgatgccaaag
cacgcccaagagcacacagcctcacccgccaaaaccgagcccaggacgttgattgccacg
ctgggcgcgggctacagcagccagtaccaaccacaacagggtcgcaaccatcaaatacta
ccccaccagcacccgcacaccctgccctcctcggacccggcagccaacgagcaccccagt
agggacaatactcaaaacaaagccgtttcggttcaggaacaggagctccgagcactcggt
aagaccaccatgactgcggccaacttcataaacgcaattatcatgcgtcaaattccttgc
gataaggggaagcgagaaagaggctcgctcgctgccagcgccgcttgtgatgttcaacag
aagatgtcttcagaatcccatctgcagcatttccgcagcgtacctgaagggtaccagtca
ccaggtcaccccacgcagcagcagcagcagcagcagcagcagacctccttcaaagggcat
cagagagtcgtcaccctggctcagcatatcaacgaggtgatcacgcaggactacacccgt
ctgtacccccagcaactgaactcccagccccagcagcagggctacccctaccagagctcc
ccagtgctggacctgagacgcacccccagtgagcagctctcccagcagcagcaggagtct
ggccagagctcccgctacactccagatggggcaggcatggacaggggccgtgacaggtct
ccgctgcagaacaaggtgtcaccaatgagtgggtcaggagatggcattgaacccatctcc
ccagcagggggcatgtctgagccagagcagtcccagggacttggctgtcacggggatcag
ggagatcaagtaatgggttcgcgctctccggcgaacaactctcagcccccagccttcttc
agcaagctgacggagagcaactcggccattgtcaaatccaagaagcaggagatgatcaag
aagatgagcgcagtcagtggaaacgagccgcacttcaacactggacagccaggaactgaa
atattcaatatgccagcttcaaccacagcagggccagtcaataatagaagccacaccact
ccagaacattccagtaacaacataggcttggaggcaattattaggaaggccctaatgggt
aaatatgatgaccaaggggaggagcgtgccgttgctattaacactctggctgccagtgca
agtgtgcctgctgctatccccattgctgctgctgatggacggaatgaggacattcactcc
ttggcagctggagggaagccaaagggcagcggccggtcgaacagccggaaaagcaagtct
ccgggcccgggcctgtccgtcggtgagaggccttcatccgtctcctctgtgcactccgag
ggtgactgcaaccgccagacaccactgaccaaccgtgtctgggaggacaggccctcttcc
acaggttcgactccctttccctgcaatccactgacaatgcaactccccactggccttgta
ccggcctcctcgacgatccagcaaggcgttgcgagcggtccgaacagagtgtgggacgag
gaaccgaagccactgctctgctcccagtacgagaccctttcggacagcgagtga
DBGET
integrated database retrieval system
