Polyodon spathula (Mississippi paddlefish): 121297228
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Entry
121297228 CDS
T07273
Name
(RefSeq) scavenger receptor class B member 1-like
KO
K13885
scavenger receptor class B, member 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03272
Virion - Hepatitis viruses
pspa04145
Phagosome
pspa04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121297228
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121297228
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
121297228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121297228
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121297228
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Phagocytosis
Scavenger receptors
121297228
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121297228
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Gene cluster
GFIT
Motif
Pfam:
CD36
Motif
Other DBs
NCBI-GeneID:
121297228
NCBI-ProteinID:
XP_041079328
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Position
22:28659284..28664254
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AA seq
265 aa
AA seq
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MAISRTKLAAGLGVAGLLTAVIGTVLVFVGPLIVDEQIVKNVQINPNSGLPYTMWKDLPV
PFFMSVYFFEVLNSNEILQGEKPLVRQKGPYVYREFRQKDNITFHDNNTVSYREYRQYHF
FRNMSIGDETDKVVIPNMLVLGVAVMMEDLPYAMKLVLSTAFKTFKEEPFLSLSVGELMW
GYNDPLVDFLNKHFPGMLPFKGKFGLFADFNNSNTGLFTVHTGVDNISKVHMVDSWNGLK
KVRSGTVCEAAETRVTVQIHIVSVY
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggcaatatcaaggactaagctggctgcaggactaggggtggcagggctcctgacggct
gtcattggcactgtgctggtgttcgtcggaccgctcattgtagacgagcaaatagtcaag
aatgtgcagataaaccccaacagtggcttgccttacaccatgtggaaagatctgcctgtg
cctttcttcatgtccgtctacttcttcgaggtcctcaattccaacgagattcttcagggg
gaaaagcctttggtgagacagaagggtccctatgtgtacagggaattccgtcagaaagac
aacataacattccacgacaacaacaccgtgtcgtacagagagtaccggcagtatcacttc
ttcaggaacatgtccataggggacgagactgacaaagttgtcatccccaacatgctggtg
ttgggagttgctgtgatgatggaggacctgccctacgctatgaagctggtcttgagcacg
gctttcaaaactttcaaagaggagcccttcctcagcctgagcgtgggggagctgatgtgg
ggatacaacgatcccctggtcgactttctcaacaaacacttcccaggcatgctgccattc
aagggcaagttcgggctgttcgctgacttcaacaactccaacactggactgttcacggtt
catacaggcgtggacaacatcagcaaagtgcacatggtggattcatggaacgggctaaaa
aaggtaaggtcagggactgtgtgtgaggcggcagaaacaagagttactgtacaaattcac
attgtgtctgtatactga
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