Polyodon spathula (Mississippi paddlefish): 121297229
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Entry
121297229 CDS
T07273
Symbol
cldn5a
Name
(RefSeq) claudin 5a
KO
K06087
claudin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03272
Virion - Hepatitis viruses
pspa04382
Cornified envelope formation
pspa04514
Cell adhesion molecule (CAM) interaction
pspa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121297229 (cldn5a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121297229 (cldn5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121297229 (cldn5a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121297229 (cldn5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121297229 (cldn5a)
04147 Exosome [BR:
pspa04147
]
121297229 (cldn5a)
Cilium and associated proteins [BR:
pspa03037
]
Other cilia and associated proteins
Stereociliary proteins
121297229 (cldn5a)
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
121297229 (cldn5a)
Exosomal proteins of colorectal cancer cells
121297229 (cldn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
SUR7
TMEM37
Clc-like
Motif
Other DBs
NCBI-GeneID:
121297229
NCBI-ProteinID:
XP_041079329
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All DBs
Position
22:28667803..28669928
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AA seq
215 aa
AA seq
DB search
MVSAVLEVFGLGLCVIGWLLVMLACGLPMWKVTAYIDANIVLAQTVWDGLWMTCVVQSTG
QMQCKTHDSMLSLTQDLQAARALTIISSVLGVFGLLVTIAGAQCTNCIQGEGSKVRIVNA
GGVIFIISGFLLLIPLCWMAHRIIVNFYDPKIPAPMKREMGAALYIGWAATALLFVGGGM
LCCSCPRRGASSYAVKYAPPIRAAQNGEYDKKNYV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgcagttttggaagtttttggcctgggactgtgcgtcattggctggctactg
gtcatgctggcctgcgggctacccatgtggaaagtgactgcctatattgacgccaatatt
gtgctggcccagacggtctgggacggtctgtggatgacctgcgtggtccagagcacgggg
cagatgcagtgcaagacgcacgattccatgctgtccctcacccaggacctgcaggcagcc
cgcgccctcaccatcatctcctcagtgctcggagtcttcgggctgctggtgacgatcgcc
ggggcgcagtgcaccaactgcatccaaggcgaagggtccaaggtgagaatcgtcaacgcg
ggaggagtgatcttcatcatcagtggctttttactcttgatacctctctgctggatggcc
cacagaatcatcgtgaatttctacgaccctaaaatacccgctccgatgaagcgagagatg
ggagccgctctgtacatcggctgggcagcgactgcgcttctgttcgtcggtggcggaatg
ctttgttgctcttgtccccgaagaggggccagttcttatgcggtcaaatatgcgccccca
ataagagcggctcagaacggggaatacgataaaaaaaattacgtttaa
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