Polyodon spathula (Mississippi paddlefish): 121297242
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Entry
121297242 CDS
T07273
Symbol
gria1a
Name
(RefSeq) glutamate receptor 1a isoform X1
KO
K05197
glutamate receptor 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121297242 (gria1a)
04082 Neuroactive ligand signaling
121297242 (gria1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121297242 (gria1a)
Ion channels [BR:
pspa04040
]
Ligand-gated channels
Glutamate (ionotropic)
121297242 (gria1a)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
GLF
Motif
Other DBs
NCBI-GeneID:
121297242
NCBI-ProteinID:
XP_041079349
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Position
22:complement(13017499..13133674)
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AA seq
900 aa
AA seq
DB search
MQRSFAFFCTSFLGVVLGVNFPNNINIGGLFPSDSHEHAAFRFAMFHHKDVPKLQPQVDM
VDINNSFAMTYAFCSQFSKGVYAIIGLYDKKTVNMLMSFCGALHVCFITPSFPIETSNQF
VMQLRPELQDALVSVIDHYKWTKFVYVYDAEAGLTVLQKVLDTAAEMNWQVTSVNVETTT
EDGYRKLFQDLDKKKERQIVLDCELDRLNAILNLIISLGKHVKSYHYILANLGFMDIDLN
QFKHGGANVTGFQVMNYTDWNVNRIMQQWLEFDSREHPREPRKRLKYTGALTFDGVKVMS
EAFQNLRKQRIDISRRGNAGDCLANPPAPWGQGIDIQRALQQVHIEGMTGNIQFNEKGHR
TNYTIHVMELAPIGAKRVGYWNEDDKFVSTETDSHAGNESIGLQNRTYIVTTILEAPYVM
LKKNHEQYEGNEKYEGYCVELAAEIAKHVGYKYRLEIVPDGKYGARDPDNKVWNGMVGEL
VYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM
CIVFAYIGVSVVLFLVSRFSPYEWHCEEIEEGQDQQQQQQQSQEQQTNEFGIFNSLWFSL
GAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAK
QTDIAYGTLDGGSTKEFFRRSKIAVFEKMWSYMKSAEPSVFVKTTDEGVIRVRKSKGKYA
YLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSPLRNPVNLAVLKLNEQGLLDK
LKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALVEFCYKSRSE
SRRMKQNINEAMRSSTLTRMSGTGSGGENGRIMSHDFPTSMQTLPCMSHTAGMGLSATGL
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcagttttgccttcttctgcaccagctttctgggggtggttttaggtgtaaat
tttccaaataatattaatatagggggtttatttccctccgattcccacgaacatgctgcc
tttcggtttgcaatgtttcaccacaaagacgttccgaaactgcagccccaggtggatatg
gtcgatatcaataacagctttgcaatgacatatgctttttgttcgcagttttcaaaagga
gtctacgccatcattggattgtatgacaaaaagactgtaaacatgctcatgtccttctgc
ggagccctgcacgtgtgctttattacaccaagttttcccatcgaaacgtcaaaccagttt
gtcatgcagttacggccggagttacaggatgccctcgtcagcgtaatagatcattacaaa
tggacaaaatttgtgtatgtttacgatgcagaggcaggactgacggttctacagaaagtg
ctggacactgctgcagaaatgaactggcaggtcacctccgtgaacgtggaaaccaccacc
gaggacggctacaggaaactctttcaagatctggacaagaaaaaggagaggcagattgtc
ctcgactgtgagctggatagactcaacgctattttaaacttgatcatcagcttaggaaag
catgtgaaaagctaccactacatcttggccaacttgggattcatggacattgacttgaat
cagttcaagcacggcggggccaatgtaactgggtttcaagtgatgaattacacagactgg
aatgtcaacaggatcatgcagcagtggctggagtttgatagcagagagcatcccagggaa
ccccggaagaggctcaagtatacaggagcgcttacctttgacggtgtcaaagtcatgtct
gaggcctttcagaacttaaggaagcagcgaattgatatttctcgaagagggaacgctggt
gactgtcttgccaaccctcctgcaccgtggggccaggggatagacattcagagagcactg
cagcaggttcatatagaaggcatgactggaaatattcagtttaacgagaaaggacatcgc
accaattataccatccatgtgatggagttggcacctattggcgctaagagggtcggatat
tggaatgaagacgataagtttgtgagcacagagacagactcccatgcaggaaatgaatct
attgggttacaaaataggacctacatcgtaacgacgattctagaagctccctatgtaatg
ctgaagaagaaccatgagcagtatgaaggcaatgagaagtatgaaggctactgtgtggag
ctggcagcagaaattgccaagcatgttggctacaaatacagactagaaattgtaccagat
gggaaatatggagccagagacccagacaataaagtgtggaatggcatggtgggagagctg
gtttatggtagagcagatgttgcagttgcacccttgaccatcacgttggtaagagaagag
gtaattgacttctccaagccattcatgagcctgggtatttcaatcatgatcaagaagcct
cagaagtctaagccaggggtgttttccttcctggaccccttagcctatgaaatttggatg
tgcatcgtctttgcctacattggcgtcagtgtagtgctcttcctggtcagccgtttcagc
ccctacgagtggcactgtgaggagattgaggaagggcaggatcagcagcagcagcagcag
cagagccaggagcagcaaaccaacgagtttgggatatttaatagtctctggttctccctg
ggggcctttatgcagcaaggatgcgatatttcgccaagatccctctcaggtcgcatcgtt
ggaggcgtgtggtggttcttcaccttgatcataatctcatcctacacggccaacttggct
gccttcctgacggtggagaggatggtctccccaatcgagagtgccgaggaccttgccaaa
cagactgatattgcatacggaactctagatggcggatccacaaaggaattctttaggagg
tccaaaatagcagtgtttgaaaagatgtggtcatacatgaagtctgcagagccgtcggtc
tttgttaagacaacggatgaaggagtaatccgggtaagaaaatccaaaggaaagtatgcc
tatttgctggagtccactatgaacgaatacattgaacagaggaagccctgtgacaccatg
aaggtgggaggcaacctggattcgaaaggatatggaatagcgacacccaaaggatctcca
ttaagaaacccagttaacctggcagtgttaaaactgaacgagcagggcctcttggacaaa
ttgaaaaacaaatggtggtacgacaaaggagagtgcggcagcgggggaggtgattccaag
gacaagaccagcgccctgagtcttagtaatgtggctggagtcttctacatccttattggt
gggctgggactagccatgctggtcgccttggttgaattctgttacaagtcacgaagcgag
tcaaggcgaatgaagcaaaacatcaatgaagctatgaggagttctacactaaccagaatg
agtggaacagggagcgggggtgagaatgggaggataatgagccacgattttccaacatca
atgcagacactgccttgcatgagccacactgctgggatgggactaagtgctactggactg
taa
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