Polyodon spathula (Mississippi paddlefish): 121297253
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Entry
121297253 CDS
T07273
Name
(RefSeq) F-box only protein 38-like isoform X1
KO
K10313
F-box protein 38
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121297253
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121297253
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
121297253
NCBI-ProteinID:
XP_041079373
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All DBs
Position
22:737701..755628
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AA seq
1135 aa
AA seq
DB search
MMVPRRKSTKPQCAGGGPADVQKQEEPKDYINKLSHEVLCHIFKYLPLLDIMCMECLSRK
LREAVMLYLRVVKVVDLCAGRWWEYMPSGFTDSSFLMLLKKMPDLEQLYGLHPRYLERRR
VRGHEAFSIPGVLEALQTCPTLLGVETSHLELVEAIWNYMPQVHVLGKFRNRNGAFPIPP
ENKLTIPIGAKVQTLHLIGVNVPEIPCIPLLRHLYLKWVRLTKPQPFKDFLCISLRTFIM
RNCAGPTNSLKYVPLVTGLASARNLEQLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTIV
FGACKNALEVDLGYLIITAARSAVFSRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLH
LGYVDEFLLQCKMSHSDLVKYGLADVTENPGIITDIGMKAVNEVFTSIKYLGIYNCPHLH
TPHTWITDRSRWSRLVDLTLLRCHAIKLESFSQFIETLPSLEFISLDQMFREPPKGCARV
GLSAGTGIGVSSALVSNQNSNNDNDNNNNNHQNNNGNIAPPGNDEAREEGGAPEQQLHAE
ELNGMEEAVQENMEAEAGVAAGSPQDSPGPTPAVKPVEVDEEQAGPSGVQPAVKKLPIVM
PDSDSEDEDDGERTAGTNEGATPGYAEEPGKRSSKGKTPLRRRGAPIPEQCCEKGCQVTS
EQIKADMKAAVETPERGGRGASSNAGRTGDGRCTCSMRWRDASAASRVQPGAGGSNEGAV
RCTCSRTRPTAEGRTRAEASEPPSSTAREQGTGPGTLPGGTGRGQGGGANETPPRTQGGP
VPQSSSRTSGHCSEEGAGGRGQDRRLRDGYPHRPVTRARSRLSLVPLVSETELSKPKPRA
AVKRKRTSDKSTSTSDPVTEDDHVQVLTLKSKNLVGITLTNCGITDLVLKDCPKMMFVHA
TRCRVLKHLKVENAPIVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLA
LEKKIFCGPYPYHICIIHEFSNPPNVRNKVRIRSWMDTIANINQELIKYEFFPEASRTEE
DVKRHPHYPWGRDIYTLEGLVDSAPYSMITDFPWLRSLRSAEPNSYARYDFEDDESTTIY
APRRKGQLSADICMETIGEEISELRQSRRGVFQRVVAIFIHYCDVRGEPVEDDYI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcccccgccggaaatccaccaagccccagtgcgcaggaggagggccggccgac
gtgcagaagcaggaggagcccaaggactacatcaacaagctctcccacgaagtgctctgt
cacatatttaagtacctgcccctgctggatatcatgtgcatggagtgcttgtctcggaag
ctgcgggaggcggtgatgctgtacctgcgggtggtgaaggtggtggacctgtgtgccggg
cgctggtgggaatacatgccctcaggcttcacagactccagcttcctgatgctgctgaag
aagatgccagacctggagcagctgtacggcctgcacccccgatacctggagcggcgacgg
gttcgaggacacgaggcgttcagcatccccggagtcctggaggctctgcagacctgcccc
acactgctgggagtagagacctcccacttggagctggtggaggccatctggaactacatg
cctcaggttcacgttctgggaaaattcaggaaccggaacggggcgttcccgatcccgcca
gaaaacaagctcaccattcccatcggtgccaaggtccagactctccacctcataggagtg
aatgtgccggagatcccctgcattcccttgctgagacacctctatctgaagtgggtccgg
ctcaccaagccccagcccttcaaggacttcctctgcatcagcctgcgcactttcatcatg
aggaactgtgcaggccccactaactccctgaagtatgtgcccctggtgacgggcctggcc
tcggcgaggaacctggagcagctggagctggtgagggtgcccttcctgggggggctgatt
cagcacgtggtggaagacagctggagatcaggagggttccggaacctgcacaccattgtg
tttggagcctgtaagaatgcactggaagtggacctgggctacctcatcattactgctgcc
cgaagtgctgtgttttccaggctgcacgaagtccgaatccagccttccctcaccaaagac
ggggtgttctctgcactgaagatggccgagctggagttcccccagtttgagactctgcac
ctgggatacgttgatgagtttctgttacagtgtaaaatgagccattctgacctggtgaag
tacggcttggcggatgtgacagagaaccctggcatcatcactgacatcggaatgaaagcg
gtcaacgaggtcttcacctccatcaagtacctcggcatctacaactgcccccacctccac
accccgcacacctggatcacagatcgctcccgctggagccggctggtggacctcacccta
ctgcgctgccatgccattaaactggaatccttcagccagttcatcgagacgctgcccagc
ctggagttcatctccctggaccagatgttcagggagccgcccaagggctgtgcccgcgtg
ggtctgagtgccggcacagggatcggagtctcctcagctctcgtcagcaaccagaactcc
aacaacgacaacgacaacaacaataacaaccatcagaacaacaatggcaacatcgcgcca
cccgggaacgacgaggcgagagaggaggggggcgcccccgagcagcagctccacgccgag
gagctcaatggcatggaggaagccgtgcaggagaacatggaagccgaggcaggggttgca
gcaggcagtccacaggactccccgggacccacaccggctgtcaaacccgtggaggtggac
gaggaacaagcagggcccagcggagtgcagcccgcagtgaagaagctgcctatagtgatg
cctgattcagacagcgaagacgaggacgacggagagaggacggccggcactaatgagggg
gcaactccgggatacgctgaggagccagggaaacgcagcagtaaagggaagacccccctg
cggcgacgaggggcccccattccggagcagtgttgtgagaagggttgccaggtgaccagc
gagcagatcaaggccgatatgaaggctgctgtcgagacccctgagcggggaggcaggggg
gcgagctcgaacgcgggtcgcactggggacgggagatgcacgtgctccatgcgctggagg
gacgcctctgcagctagtcgagtgcagccgggggcgggaggcagtaacgagggagcggtg
cgctgcacttgcagcaggactcggcccactgcagagggcaggactcgagccgaggcaagt
gagcctcccagcagcacggccagagagcaggggacaggccctggaacactgcccgggggg
acagggcgtgggcaggggggtggggccaatgagacccctcccaggactcaaggtggccca
gtgccgcagagcagcagtaggactagtgggcactgctctgaggaaggggcagggggcagg
ggacaggacaggaggttgagagatgggtacccacaccgacccgtcaccagagccagaagc
aggctgtcactcgtgcctctggtctccgagacagagctctccaaaccaaagccgcgggcc
gctgtgaaacggaaacgaacctcggacaaatccacaagcaccagcgaccccgtcaccgag
gacgaccatgtgcaggtgctgactctaaaatccaaaaacctggtggggatcacgttaaca
aactgtgggataacggacttagtgttgaaagactgccccaaaatgatgttcgttcacgct
accaggtgccgcgtgctgaagcacctgaaggtagagaacgcgccgattgtgaaccgcttc
gattacgcacagtgcaaaaagctgaacatggatcaggtgctggaccagatactgcgcatg
cctcccgaaaggaaccgcatcatctacctgcgccccatgcagcaggtggacacgctagcc
ctggagaagaagatcttctgcggaccctatccctaccacatctgcatcatccacgagttc
agcaacccccccaacgtgaggaacaaggtgcgcatccgcagctggatggacaccatcgcc
aacatcaaccaagagctgatcaagtatgagttttttccagaagcctcccggactgaggag
gatgtaaagaggcacccacactacccctgggggcgggacatctacactctggagggtcta
gtggacagcgccccgtactctatgatcacagacttcccgtggctccgatcactccgctcg
gccgagcccaacagctacgcgcgctacgacttcgaggatgacgagagcaccaccatctac
gccccgcggcggaagggccagctgtctgcagatatctgcatggagacgatcggggaggag
atctcagagctgcggcagagcaggcggggcgtgttccagagagtggtggccatcttcatc
cactactgcgacgtgcggggcgagccggtggaggatgattacatatag
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