Polyodon spathula (Mississippi paddlefish): 121297259
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Entry
121297259 CDS
T07273
Symbol
pdlim7
Name
(RefSeq) PDZ and LIM domain protein 7 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121297259 (pdlim7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121297259 (pdlim7)
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121297259 (pdlim7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
PDZ_2
DUF4749
Motif
Other DBs
NCBI-GeneID:
121297259
NCBI-ProteinID:
XP_041079382
LinkDB
All DBs
Position
22:complement(2298246..2329503)
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AA seq
496 aa
AA seq
DB search
MDVYTVTLEGPAPWGFRLQGGKDFSMPLTVSRLTPGGKAVQANVGVGDWVVSIDGANTES
MTHVEAQNKIRACTGNLTLSLSRAVISPGSNQKDSLAAGLPQPKYSFAPSMSLNKMARPF
GAGERSGNSKSGPVTKPVSYVPAAVKLNPSSQGPVSVLQQHNGHSLRMDQVQCNLSNDSS
KKRLMEDTQDWQPRTGTTQSRSFRMLAQLTGTEFMQDPDDENLKRSRHEVNQPAAKTATT
AAAVDKPHGGLARAPAPSSTPSYRPPWITDPGFADRYRPDKTSTVLTQHSQPAQPTPVQN
RSSIMQAAQQAPEGSGRTPVCGQCNKIIRGRYLVALGKSWHPEEFTCCQCKVVLEEGGFF
EERGSIYCTKCYDSRYAPNCAKCKKTIAGEIMHALKMTWHVQCFVCAACKAPIRNKAFYM
EEGEPYCETDYDKMFGTKCSGCDFKIDAGDRFLEALGTSWHDTCFVCAICQINLEGKTFY
SKKDKPLCKTHAFSHV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctacactgtgactcttgagggaccggctccctggggattcagactgcaagga
gggaaggatttcagcatgccactcacagtctcgcggctcacccccggcgggaaggccgtg
caggctaacgttggcgtgggagactgggtggtgtccatcgacggtgccaatacagagagc
atgacccatgtggaggcacagaacaagatccgagcatgcactggcaacctgacactctcc
ctgagcagagctgtcatttcacctgggtctaatcagaaggactcgcttgccgctggtttg
cctcagcccaagtattcgtttgctcccagcatgtctcttaataagatggcccgtcccttt
ggtgccggggaacgctctggcaactcgaaatccgggccggtcaccaaaccagtgtcttat
gtccccgcggcggtgaaattgaaccccagctcccagggtcctgtcagtgtgctgcagcaa
cacaatgggcactccctgcggatggaccaggtgcagtgcaatttgtccaacgactctagc
aaaaagaggctgatggaggatacacaggactggcagccacgcactggcaccacccagtcc
cggtccttccgaatgcttgcccagctcacaggcacagagttcatgcaggatcctgatgat
gagaacctaaaaaggtcccgccacgaagtgaatcagcctgctgccaagacggcaaccact
gcggcagctgttgataaaccccatggcggtctggccagagctcccgctccttcctcaacc
ccctcatatcgccctccttggataacggacccaggcttcgctgaccgctaccgtcccgac
aagaccagcacagtgctgacccagcacagccagcccgcccagcccacgccagtgcagaac
cgcagctccatcatgcaggcagcacagcaggctcccgaaggcagtggaaggaccccggtg
tgtgggcagtgcaacaagatcatcaggggccgatacctggtggcactgggcaaatcctgg
caccctgaggagttcacgtgctgccagtgcaaggtggtgctggaggagggaggcttcttc
gaggagagaggctccatctactgcaccaagtgctacgacagccgctacgcacccaactgt
gccaagtgcaagaagacgattgctggagagatcatgcacgccctgaagatgacctggcac
gtgcagtgctttgtatgcgctgcctgcaaggccccgatcaggaacaaagccttctacatg
gaggagggggagccctactgtgagacagactacgacaagatgtttggcactaaatgcagt
ggctgtgacttcaagatcgacgctggagaccgtttcctggaggctctgggcacgagctgg
catgacacctgctttgtctgcgctatctgccagattaacttggaagggaagaccttttat
tccaagaaggacaagcccttgtgcaagacccacgcgttttcacatgtctga
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