Polyodon spathula (Mississippi paddlefish): 121297278
Help
Entry
121297278 CDS
T07273
Name
(RefSeq) protein strawberry notch homolog 1-like isoform X1
KO
K26273
protein strawberry notch
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121297278
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121297278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
RESC11
Motif
Other DBs
NCBI-GeneID:
121297278
NCBI-ProteinID:
XP_041079444
LinkDB
All DBs
Position
22:25918720..25935126
Genome browser
AA seq
1409 aa
AA seq
DB search
MREQIPEIRSSDRRLESREMMDPGQDLLLAALSESGISPNDLFDIGPLDPGLGAPLPSVG
NQQSVPISALEQDLGAGPAVTVKQGPVLPPTPTVTVRKPQPSTTTFVLNQLNQLPSLGTI
VVTKPSGTTSRQTVTVTKIVHTSATTQPSYTSPVMRTTLTTPGKDQIQLKDLLRNSSLNE
LMKLKPPSNIAQPVATAATDLNNGVKKEVSNKDVARIWINDDIKMRSFSPTNKIPGIKEE
EEPDEEDEEELGHAETYAEYMPMKLKVGLRHPDPVVETSSLSSVSPPDVWYRLSLSEEII
DRGWLSALQLEAITYTAQQHETFLPNGDRAAYLIGDGAGVGKGRTIAGIIHENYILGRKR
ALWFSVSNDLKYDAERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLI
GESQSGGKYKTRFKQLLHWCGEDFDGVIVFDECHKAKNVCPIGNSKPTKTGLAVLELQNK
LPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFKEFSNFIQAVERRGVGAMEIVAMDM
KLRGMYIARQLSFSGVTFKIEEVPLTQDYVKMYNKAVHLWVAAREKFQLAANLMDAEQRM
KKSMWGQFWSAHQRFFKYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEE
GGGELNDFVSTAKGVLQSLVEKHFPAPDRQKLFSLLGIDLSAQKTPSPNDCSSTDNKGKK
RKGQDTKKEAKKPRKSGGLGGSSSDESDSDSASAKEAESDNDSFKSVSSGEDDEDDFNPF
RDESSEDDEDDPWLIRKDHKKTKDKKNKKKKKNIDPDSIHSALLASGLGSKRPAFSTPVV
NTTSSAPSIAKKDSESSSCVTSQDAVESAQQMKRELLDKLEKLAEDLPPNTLDELIDELG
GPDNVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNITEKQRFMDGEKNIAIISEAA
SSGISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGE
QRFASIVAKRLESLGALTHGDRRATESRDLSRFNFDNKYGRSALEIVMKSIVNLDFPIVS
PPANFDGDFFKEIRHGLIGVGLINVEDRSGILMLDKDYNNIGKFLNRILGMEVQQQNALF
QYFSDTLSAVIQNAKKNGRYDMGILDLGSGDEKVRKVESKKFLTPGYSTSGHVELYTVSV
ERGMSWEESTRVWAEQSGPDDGFYIQIRNNKKTAILVKEVNAKKRLFLVYRPNTGKQLKL
EVYADIKKKCKKVLSEDAKQHWIDQYNSSADTCSHAYWRGNCKKASVGLQCEIGLRCRTY
FVLCGSVLSVWTKVEGVLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVAPLTNILSS
SDQSQQLAVQQQQMWQQLHPQSINHFSNT
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgagggagcagatacccgaaatccgcagcagtgaccggagactagaaagcagagaaatg
atggatccaggtcaagacctgttacttgctgctctgagcgagagtggaatcagtccaaat
gatctctttgatattggtccgctggatcctggattgggggctcccttgccatctgttggt
aatcaacagtcagtaccaattagtgcattggaacaagacttgggagcaggaccagcagta
acagtgaagcagggaccagttcttccacctactccaacggtgactgttaggaagccgcaa
ccctccaccacaacatttgttttgaatcagctgaatcagctcccatctctgggaacaata
gttgtgaccaagccttctggcacaacatccagacagactgtcacggtgacaaaaattgtt
cacacctctgcgacaacgcagccatcctacacaagtccagtaatgcgcactacactgacc
acacctggcaaggaccagattcaactaaaagacctccttagaaacagcagtctcaatgaa
ctgatgaaacttaagccaccttcaaatattgctcaaccagtagcaacagctgccactgat
ctaaataatggtgtaaagaaggaagtctcgaacaaagatgttgcacgaatctggattaat
gatgacattaaaatgcggagcttttcgcctactaacaaaataccaggaataaaagaggaa
gaggaaccagatgaggaggatgaggaggagcttggccacgcagaaacatatgctgaatac
atgccaatgaaattgaaagttggtctgcgtcatcctgacccagtcgttgagacaagttca
ttgtccagtgtttctccacctgatgtgtggtacaggttgtctttatctgaggagattatt
gatagaggatggctttcggcattgcagcttgaagcaattacatacacagcacagcaacat
gaaacgttccttccaaatggagacagagctgcctatttaataggtgatggagctggcgta
gggaaagggagaaccattgcaggcatcatccacgagaattacattttgggcaggaaaagg
gcactctggtttagtgtttccaatgacttgaagtatgatgctgaaagagatttgagagac
attggagccaaaaatatccaggtccattcactgaataagtttaaatatgggaagatttct
tccaaacacaatggaagtgtgaagaaaggtgtaatttttgccacttactcatctctgatt
ggtgaaagtcagtctggtggaaaatacaagaccagatttaaacagcttcttcattggtgt
ggtgaagattttgatggagttattgtgtttgatgaatgccacaaagctaaaaatgtatgt
ccaattgggaattcgaaacctaccaagactgggttagctgtcttagaactgcaaaataaa
ctgccaaaagcaagggtggtgtatgcgagtgctacaggtgcctctgagccacggaacatg
gcatatatgaatcgtcttggaatttggggtgaaggaactcccttcaaggagttcagcaat
ttcattcaagctgtggagagaagaggggttggtgccatggaaattgttgccatggatatg
aagctacgtggaatgtacattgcaagacagctgagcttttcaggtgtgaccttcaagatc
gaggaagttcctctgacccaagactatgtcaagatgtataacaaggctgttcatttgtgg
gttgcagccagagagaagttccagctggcagcaaacctcatggatgcagagcaacggatg
aagaagtctatgtgggggcagttctggtcggcacaccaaaggttcttcaaatatctctgt
atagcatcgaaagtgaaaagagttgtgcaacttgctcgagaagaaataaaaaacggaaag
tgtgtagttattggtcttcagtccactggagaagcccgcacactagaagcactggaagag
ggaggaggggagctaaatgactttgtttccacagcgaagggagtgctacagtccctggta
gagaaacatttcccagcacccgacagacaaaagctgtttagcttattgggaattgattta
tcagctcagaaaactccatctcccaatgactgttcctctacagacaataagggaaagaaa
cggaaaggccaagacacaaaaaaggaagcaaagaagcctcgcaagtctggaggacttggg
ggcagcagttctgatgaaagtgacagcgactctgcttctgcaaaggaagctgaaagtgac
aatgacagtttcaagtctgtcagctctggtgaggatgatgaagatgacttcaatcctttc
agagatgaatccagtgaggacgatgaagatgatccttggctaataagaaaagatcacaag
aaaactaaagacaagaagaataaaaagaaaaagaaaaatatagatccagattctatccac
agtgccttattagcatctggtcttggctcaaaacgacctgctttttcaactcctgttgtt
aacactacgagcagtgcaccttccattgcaaaaaaagacagtgaaagtagcagctgtgta
actagccaggatgctgttgaaagtgcccagcagatgaaacgagagctgctagacaaactg
gagaagcttgctgaagatctgcctcccaacacactcgatgaacttattgatgaacttgga
ggtccagataatgtggcagagatgactgggcgtaagggcagagttgtgagtaatgatgac
ggaagcatatcctatgaatcaagatcagagcttgatgttccggtagaaatcctgaatatc
acagagaaacagaggttcatggatggagagaagaacattgccataatatcagaagctgca
agttctggtatctccttgcaagcagaccggagagttaaaaaccaaaggagacgagtgcac
atgactttggagttgccctggagtgctgatagagccattcagcagtttggacgaacacac
agatcaaaccaggtgactgctccagagtacgtgttcctcatatccgagctcgctggagaa
cagagatttgcatcaattgtggccaaaaggcttgagagtttgggagcccttacacatggt
gataggagagccaccgaatccagagacctaagcagattcaattttgacaataagtatggt
agaagtgctctggaaattgtgatgaagtccattgtaaacttggatttcccaatagtgtca
ccccctgctaactttgatggagatttctttaaagaaattcgtcatgggttgattggtgtt
ggattaataaatgtggaagatcgttcaggaatcctcatgttggataaagattataacaac
attggcaagttcttgaatcgaattcttggaatggaggtccaacaacagaatgcactcttt
cagtatttctctgacacattaagtgctgtaattcagaatgccaaaaagaatggtcgatat
gatatgggtatattggatcttggctctggggatgagaaggtgaggaaagtagaatccaag
aagtttcttactccaggatattctacctcaggacatgtggaattgtatacagtaagtgtc
gagagaggtatgtcttgggaggagtccaccagagtttgggctgagcaatcgggaccagat
gatggattttatatacagataaggaacaacaaaaagactgcaatccttgttaaggaagtt
aatgccaaaaagaggttgtttctggtgtatagaccaaacacaggaaaacagctcaaactg
gaggtctatgcagacattaagaagaaatgcaagaaggtactttctgaagatgccaagcaa
cattggatagatcagtacaattcatcagcagacacatgttcccatgcctattggcgaggc
aattgcaaaaaggcatccgtaggactgcaatgtgaaattggtctacgctgccgaacgtac
tttgtgctttgtggttcggtactgagtgtctggactaaagttgagggtgttctagcctca
gtgagtggaactaatgtgaaaatgcagattgttcggttaagaacagaagatggacagagg
attgtgggtttgatcattcctgcaaattgcgtggctccgttaacgaacatcctttcctcc
tcggatcagtctcagcagctagcagtgcagcagcagcagatgtggcaacagcttcatcca
cagagcattaaccacttcagcaacacatag
DBGET
integrated database retrieval system
