Polyodon spathula (Mississippi paddlefish): 121297280
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Entry
121297280 CDS
T07273
Name
(RefSeq) HLA class II histocompatibility antigen gamma chain-like
KO
K06505
CD74 antigen
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121297280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pspa04090
]
121297280
00535 Proteoglycans [BR:
pspa00535
]
121297280
CD molecules [BR:
pspa04090
]
Proteins
121297280
Proteoglycans [BR:
pspa00535
]
Cell surface proteoglycans
Others
121297280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC2-interact
MHCassoc_trimer
Thyroglobulin_1
Motif
Other DBs
NCBI-GeneID:
121297280
NCBI-ProteinID:
XP_041079448
LinkDB
All DBs
Position
22:complement(10771085..10777754)
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AA seq
289 aa
AA seq
DB search
MSQEQLMGNEAAPPGEHTGLIRSDSGRGSSSRGWKIGGFTLLGLLLIAGQAITVYFVMAQ
KGQISSLQEHTDILKKQLNNQQHAPPSPSKMLRMSMFNMPMLVSDSVNEKPKKIPMIPLE
DTSTVSLEKQVKGLLQQEDPDQPLPQFNETLLDNLKSLKEQMNSSEWKSFESWLRQWLLF
QMAQKKPAQPTTAPVQTTTAMEESGVQSKCQLEASAPSVHPGVYRPQCDEEGNYLPKQCW
SSTGYCWCVDKNGDELAGTRTRNRLDCNFGLRRLAMPSFAAVKMIDKDN
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagaacagctaatggggaacgaagctgccccaccgggagagcacacaggtctg
attaggagtgacagtggcagaggctcctccagtcgtggctggaagatcggtggattcact
ttactggggctgcttctgattgctggccaggcgatcactgtttactttgtgatggctcag
aagggacagatctcctccctgcaggaacacacagacatactgaagaaacagctcaacaac
cagcagcatgctcccccgtctccttccaagatgctgcgtatgtccatgttcaacatgccc
atgctggtcagcgactctgttaatgagaagcccaagaagatccccatgatacccctcgag
gacacttccacagtgagcctggagaagcaagtcaaaggcctgctgcagcaggaggaccct
gaccagcccctgccccagttcaacgagactctgctggataacctgaaaagcctgaaggaa
caaatgaatagctcagagtggaagagttttgagtcctggctccgtcagtggctgctcttt
cagatggctcaaaagaaaccagctcagcccaccacagctccagtgcagaccaccactgct
atggaagagtctggcgtgcagtccaagtgtcagctggaagcctcagccccctctgtccat
cccggtgtgtaccgtcctcagtgtgatgaggagggcaactacctgcccaagcaatgctgg
tccagcactgggtactgctggtgtgtggacaagaatggagacgagctggccggaaccaga
acccgcaatcgtctggactgcaactttggcctacgcaggttggcgatgcccagctttgct
gcagtgaagatgatcgataaggataactag
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integrated database retrieval system
