Polyodon spathula (Mississippi paddlefish): 121297284
Help
Entry
121297284 CDS
T07273
Name
(RefSeq) vesicular integral-membrane protein VIP36-like isoform X1
KO
K10082
lectin, mannose-binding 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121297284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121297284
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pspa04091
]
121297284
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
121297284
Lectins [BR:
pspa04091
]
L-type lectins
121297284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Lectin_L-type_dom
UL42
Motif
Other DBs
NCBI-GeneID:
121297284
NCBI-ProteinID:
XP_041079452
LinkDB
All DBs
Position
22:1270391..1277566
Genome browser
AA seq
358 aa
AA seq
DB search
MAFEKSNAAAMSGLRGVRSGKTGALCRCVSLYLLLGWLPVSLVQADITDGNAEHLKREHS
LIKPYQGVGTSSTPLWDFGGSTLLTSQYVRLTPDERSKQGSIWNRVPCFLKDWELHVQFK
IHGSGRKNLHGDGIGIWYTKEKLQPGSVFGSQDHFVGLGIFVDTFRNDLQGMDRSFPYIS
AMVNNGSLVYDHGKDGRPTELGGCSAEVRNQDHDTYLAVRYSKGRLTVMIDVEDRNEWKE
CFDVAGVRLPTGYLFGASAATGDLADNHDILSMKVYQLMVDHTPEEDSMDWTKIEPSVSL
LKSPKDNIDDPTGNFRSTPLTGWKVFLLLLCALLGIIVCAVVGAVVFQKRQERNKRFY
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgagaagagcaatgctgcagctatgtcggggctccgaggtgtccgctctggg
aagactggggcattatgccgatgtgtcagcttgtacctgcttttggggtggctcccagtc
tctctggtccaggctgatataacagacggcaacgccgaacacttaaagcgggagcactcg
ctcatcaaaccataccagggtgtggggacaagttcaactcctctctgggatttcggaggc
agcacgctgttgaccagccagtatgtcagactgacccctgatgagagaagcaaacagggg
tccatttggaacagagtgccgtgtttcctgaaggactgggagttacatgtccagttcaaa
atccatgggtcaggaaggaagaatctgcatggagatggaattggcatctggtacacaaaa
gagaagctgcaacctgggtctgtctttggaagccaggatcatttcgttggactgggcatt
tttgtggatactttccgcaatgatctccaaggaatggatcgttcattcccttatatatct
gccatggtaaataatggatccctggtttatgaccacgggaaggacgggcgcccgactgag
ctgggggggtgttcagcagaggtgcgtaaccaggaccacgatacctacctggccgttcgc
tactccaagggcaggctgacggttatgattgatgttgaagaccgcaacgaatggaaggaa
tgcttcgatgtcgcaggagttcgactccccactggatacttatttggggcctctgcagct
acaggtgaccttgcagataaccatgacatcctctcaatgaaggtgtaccagctgatggtg
gaccacacccctgaggaggacagcatggactggaccaaaatagagcccagtgtcagcctg
ctcaaatcacccaaagacaacatcgatgacccgactggtaatttccgaagcacccctctg
actgggtggaaggtgttcctgctgctgctctgcgctttgcttggcatcatcgtgtgcgcg
gtggtgggcgccgtcgtcttccagaaacgccaggagagaaacaagcgtttttattga
DBGET
integrated database retrieval system
