Polyodon spathula (Mississippi paddlefish): 121297336
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Entry
121297336 CDS
T07273
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pspa04054
]
121297336
Pattern recognition receptors [BR:
pspa04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
121297336
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
LRR_1
LRR_9
TIR_2
LRR_NXF1-5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
121297336
NCBI-ProteinID:
XP_041079541
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All DBs
Position
22:complement(1059151..1064914)
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AA seq
954 aa
AA seq
DB search
MMLGILLTFAFFLLESWVQIAPTAGYSLRNCTVQGSLNYTDRLKVLCYQMNFYHVPSDIP
HNTKVLDISGNRISQLQENDFRNLTNLKNLNVSHNQISHVEPGTFRDLAGLQELNLTLNK
LSVLSSNMFYGLYNLTVLKLAWNRIQKIHPDAFLVLANVRVVNLTSNALYQLEEVQPVLK
CPHLEELSLGSNGFSTFNTKELTSVPLNLRVLDLSSNPFTSFNVSTDIFPHLVDLDLSYS
GAKDGLHWEMRNHSFLTGVKTLSLNGTRISTPGIFPVIESFASSLEVLHLNDLHVDTVDN
ILKNVCLSLPNLQILSLRGDNLSTLQDRLFERCLLVYHLDLSDNQLKSVSDFSFRGMDSL
RVLYLSHNQLVAVPNATQSISNLEYLDFSYNLIDHLQSWDFNNLTRLKHLILVGNKISMI
TGSLFGSLVSLQELKLGINLILSIPEPLSGSLHKLEILELRSNKLSIIKKNTFQNLGSLK
SLNLVDNQIADIEEGAFKGLVQLKVLLLGSNKLTRDTFTRENVLTGMPSLTELQIFDNYL
EYESNAELKTPPFKALKSLIFLAINSQGHNGLVHLPSNFLEGLSSLKELHAGNLNLDFIH
PSTFNHTPQMSFLDISKNALSSVDPKTFQTMPNLTEFILSQARLPSFDFLAQANLSKLKF
LRARGNEVSVVNKTLILSLPALKYLDLQQNPFTFGCENAWFLNWSRQDPYTQVIYLNKYS
CGYPDNLRGTKLEDLRIESCTVDLEFIFFVSTSTLVTLTMVSSFIYQFLRWQLVYAYHLF
QAFLYDRKQKPSRRYEFDAFVSYNTHDEPWVLRELLPNLEEGRGWKLCLHHRDFQPGKPI
IDNIVDNIYKSRKTLCIISRHYLESEWCSREIQVASFRLFDEQKDVLVLVFLEDIPDCQL
SPYHRMRKLVKKKTYLNWPKCEEKTRLFWHKLNTALETREEPDEESPILTGLDS
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttgggattctcttaacctttgcttttttcctcctggaatcctgggtgcagatt
gcgccgacagcaggatactccctaaggaactgtacggtccaaggctctctaaattacact
gaccgactgaaggtcctttgctatcagatgaatttctaccacgtgccttctgatatccct
cacaacacaaaggtcttagacatttctggcaatcgtatctcacagcttcaggaaaatgat
ttcagaaacctgacaaacctgaagaacctgaacgtgtctcacaaccaaatctctcacgtg
gagccgggcacgttccgagatctcgcaggcttgcaggagctaaatctgaccctgaacaag
ctgagcgtgctctcaagcaacatgttctatggactgtacaacctcacggtgttgaaactg
gcttggaaccgcatacaaaagatacaccccgatgccttcctggtccttgccaatgttagg
gtggtgaacctgacatcgaatgcgctctaccagcttgaggaagttcaacctgttttaaaa
tgccctcacttagaagagctgagcctgggatccaatggcttttcaactttcaacaccaaa
gagctgacaagcgttcccttgaatttgagagtgcttgacctgtctagtaacccattcact
agttttaatgttagcacagacattttcccccacctcgtggatctggatctctcctactca
ggtgcaaaggatgggctgcactgggagatgagaaatcattcttttttaactggtgtgaag
acactgtctttaaacggcacccgcatttcaacacctgggatcttccctgtgatagaaagc
ttcgctagttctttagaagttctccacctaaatgatttacatgtggatacagtggataac
atcttaaagaacgtctgcctctctttacctaatctccagatcctcagcctgcgaggggat
aaccttagcactctccaggacaggctctttgaacgctgtttgctggtgtaccatttggat
ttatcagataaccaactgaaaagcgtgtcggatttctctttcagagggatggacagctta
cgtgtcctgtacttgtcccacaaccagctggtcgctgttcccaatgccacccagagcatc
agcaacctagaatatttggacttcagctacaatctgatcgatcatctacagagctgggat
ttcaacaacttgaccaggcttaagcatctcatcctggtggggaacaaaatatcgatgatc
acgggttctctgttcggatccttagtcagcctacaggagctgaaacttggtattaatctg
atcctgtccatcccagagccattgtcaggcagcctacataaacttgagatcctggaactg
cgatccaacaagctgagcatcataaaaaaaaacacctttcagaacctgggttcccttaaa
tccctcaacctagtggacaatcagatagctgacattgaggagggggcttttaaagggtta
gtccagctgaaagtgctgctgctgggaagcaacaagcttaccagagacacttttacaaga
gagaatgttttgacaggcatgccttccctcactgaacttcagatctttgacaactacttg
gagtatgagagcaacgcagagctaaagacccctcctttcaaagccctgaagtctttgatc
ttccttgccattaacagccaaggtcacaatggccttgtccatctgccttccaattttctg
gaagggttaagctccctcaaagaactacatgctggcaacctgaacttggactttatacac
cccagtaccttcaaccacactccccagatgtccttccttgacattagcaaaaatgctctc
agttctgttgacccaaaaacctttcagacgatgcctaacctcacagaattcatcttgagc
caggcacgcctgccatcatttgattttctggcccaggccaacctttccaagcttaagttc
ctgcgagcgaggggcaacgaggtttctgtggtcaacaagactctgatcctctccctccct
gcgctcaagtacctggacctgcagcagaacccattcacctttggatgtgagaacgcctgg
ttccttaactggtccaggcaggacccctacacacaggttatctacctgaacaaatattcc
tgtggatatccggacaatctcagaggaacgaagctagaggacttgaggatagagtcttgc
actgtggatctggagtttatcttttttgtctcaacttccacccttgtgactcttaccatg
gtgtcctccttcatttaccagttcctccgctggcaacttgtctatgcctaccatctcttc
caagcgttcttatacgacaggaagcagaagccgtcccgacgctacgagtttgatgccttt
gtttcgtacaacacgcacgatgagccttgggtcctgagggagcttctgcccaacctggag
gagggccgtggctggaagctgtgtctgcaccaccgagactttcagcccggcaagcccatc
attgacaacattgtggacaacatctacaagagccgcaagaccctctgcatcatcagtcgc
cactacctggagagcgagtggtgctccagggagatccaggtggccagcttccgtctcttt
gacgagcagaaggacgtgctggtcctggtgttcctggaggacatccctgactgccagctc
tccccctaccacaggatgaggaagctggtgaaaaagaaaacctacctgaactggcccaaa
tgtgaggaaaaaaccagactgttctggcacaagctgaacacagcactggagacccgagaa
gaacccgatgaggagagtccgattctaactggcttagactcctga
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