Polyodon spathula (Mississippi paddlefish): 121297337
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Entry
121297337 CDS
T07273
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pspa04054
]
121297337
Pattern recognition receptors [BR:
pspa04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
121297337
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_14
LRR_9
LRR_EndoS
LRR_At5g56370
LRRCT
Motif
Other DBs
NCBI-GeneID:
121297337
NCBI-ProteinID:
XP_041079544
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All DBs
Position
22:1052503..1055772
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AA seq
953 aa
AA seq
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MVGTYFIFLIFLLNCWVKIMPTSGYSLRNCTAHGALRFTGLKLLCFRKNLYCVPPDIPHN
TKFLDISWNNISQLRQGDFRNLIYLMGLNASNNQIHHIDRHAFKDLTALQVLNLSQNHLR
ALTEGLFEGLENLTELQLGGNHIQKIETYTFRFMNNIKVLDLSANALLRIERVQPVFRAS
NLEQLYLRQNNFTSFNTEDFSNVSLKLKVLDLSLNPFRNFSITTNIFPCVVSLKLLDSEE
GLNWMVANKSFLHSVKKLSLSGFHTAKPEILSGIIKSFANSSLKDLQLDDFQLTEDKMFL
NNVCRLLPKLQTLGLKRNNITLQYNPFVYCSMVSHLDLSWEGLKYTPESLFKGMHNLLYL
SMAHNHLSDVPSAIRNVCTLQTLDLGFNRIGKLQPRGFSTLMRLKVLILDGNNINAMDSV
HFEGLANLEELRVKRNNIQEITGSWSTTLRRLRFLDMKFNKLGYISNDIFQNMHSLKSLE
MVGNHIYKFDVGAFKDLSNLKYLQLGKNPLKVQSLEEGDVFAGMSLLKLLKLFDCNLCYK
TSDELKQPPFTTLKSLMYLSINSQGPNCLVRIPSNFLKGLSSLRELHAGHQNIDFVHPKT
FSHTPNLTYLDLSNTMIKVLDPQIFLTVPKLSILHLNKAHLQSLDFLVHANLARLKFLSA
TANQFTVVNVAHIKALPLLRFLNLTNNPFICSCENAWFQNWSLQYSMAQVLNFYDITCNY
PAKYKGFKLADFNVDSCKLDYDFICFIVSSTLVAVTMVSSFIFHFLHWQLVYAYHLFQAF
LYDRKQKPSRRYEFDAFVSYNTHDEPWVLRELLPNLEEGRGWKLCLHHRDFQPGKPIIDN
IVDNIYKSRKTLCIISRHYLESEWCSREIQVASFRLFDEQKDVLVLVFLEDIPDCQLSPY
HRMRKLVKKKTYLNWPKCEEETRLFWHKLNTALETREEPDGENPILTGLEAFD
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggttgggacttacttcatctttctgatcttcctccttaattgctgggtgaagattatg
ccaacgtctggctattcactcagaaactgcacagcccacggtgccctgagattcaccggt
ctgaaactgctctgtttccgtaaaaacttgtactgcgtgcctccagatatccctcacaac
accaagttcttggatatttcatggaacaatatatcccagctacgacaaggagatttcaga
aacctaatatacctcatgggcttgaatgcatctaacaaccaaatccaccacatagacagg
catgcttttaaagacctgactgcgctgcaggtgctgaatctctcccagaaccacttgaga
gcgctcacagagggcctgttcgagggtttggaaaacctcactgagcttcagctgggcggc
aaccacatacaaaagattgagacctacacctttcggtttatgaacaacatcaaggtcttg
gacttgagtgcaaacgcattgcttcgaatagagagggtccagcctgtgttcagagcctct
aacttggagcaactgtatcttagacagaacaacttcacaagtttcaacactgaagatttt
tcaaatgtttccttaaaactgaaagtgctcgacctgtctttgaaccctttcagaaacttt
agcattacaacaaacatctttccctgtgtcgtctctttgaaactcttggattcagaagaa
ggactgaactggatggttgcgaacaagtcttttctgcatagtgttaagaaactttcactg
agtggttttcacacagcaaaacctgaaatattatcagggataataaaaagctttgctaac
tcctctctgaaagatctccaactcgatgatttccaattgacagaagacaaaatgttctta
aataatgtctgtcgcttgctccccaaactacagactcttggccttaaaaggaataatatt
actctccagtacaatccatttgtctactgctcgatggtgagccatttagatctatcatgg
gagggtctgaaatacacaccagagtccttgttcaaaggcatgcataatttgctctatctg
tcaatggctcacaatcatctttcagatgttcccagtgctatccggaatgtctgcacactg
caaactctggaccttggcttcaatcgcattggcaagttgcagcccagaggcttctccaca
ttaatgaggttgaaggttctcatcttggatggaaacaatatcaatgcaatggacagtgta
cactttgagggcttggctaacctggaggagctcagggttaaaagaaacaacatccaggaa
atcacaggctcatggtcaaccactctacgacgtctgagattcctagatatgaaattcaac
aagttgggctacatcagtaatgacatcttccaaaatatgcattctttgaaatctcttgaa
atggttggcaatcatatttacaaatttgatgttggtgctttcaaagacttaagcaatctt
aaatatctgcagctcgggaaaaacccgctgaaggtgcaatctctcgaagagggagatgtg
ttcgcaggaatgtccttactaaagttgcttaaactctttgactgcaatctttgctacaag
acctcagatgagctcaagcaacctccgtttacaactctcaaatctttgatgtacctctct
atcaatagccaaggtcccaactgccttgttaggattccatcaaactttctgaaagggctt
agttctctcagagaactccatgctggccaccaaaacattgactttgtgcaccctaaaacc
ttcagccacacccccaatttgacttatttggacctcagtaacaccatgatcaaagtacta
gatccccaaatatttctcacagtgccaaaactctcgatattgcacttgaataaagcccat
ctacagtccttggacttcttggttcatgcaaaccttgccaggctcaagttcctttcagcc
acagccaatcagttcactgtggtcaatgtggcccacatcaaggcccttcccctcctcagg
ttcctcaacttgacgaacaatcccttcatctgcagctgtgaaaatgcttggttccaaaac
tggtcactgcagtactctatggctcaagttctcaacttctatgatattacctgcaactac
ccagctaagtacaaaggatttaaacttgcagatttcaatgtagactcttgcaaactggac
tacgattttatatgctttattgtgtcctccacccttgtggctgttaccatggtgtcctcc
ttcatcttccacttcctccactggcaacttgtctatgcctaccatctcttccaagcgttc
ttatacgacaggaagcagaagccgtcccgacgctacgagtttgatgcctttgtttcgtac
aacacgcacgatgagccttgggtcctgagggagcttctgcccaacctggaggagggccgt
ggctggaagctgtgtctgcaccatcgagactttcagcccggcaagcccatcattgacaac
attgtggacaacatctacaagagccgcaagaccctctgcatcatcagtcgccactacctg
gagagcgagtggtgctccagggagatccaggtggccagcttccgtctctttgacgagcag
aaggacgtgctggtcctggtgttcctggaggacatccctgactgccagctctccccctac
cacaggatgaggaagctggtgaaaaagaagacctacctgaactggcccaaatgtgaggaa
gaaaccagactgttctggcacaagctgaacacagcactggagacccgagaagaacccgat
ggagaaaatccgattctaactggcttagaggcgtttgactaa
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