Polyodon spathula (Mississippi paddlefish): 121297346
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Entry
121297346 CDS
T07273
Name
(RefSeq) protein HIRA-like
KO
K11293
protein HIRA/HIR1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121297346
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
121297346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
HIRA_B
Beta-prop_HPS5
NBCH_WD40
WDR90_beta-prop_4th
WD40_like
Motif
Other DBs
NCBI-GeneID:
121297346
NCBI-ProteinID:
XP_041079558
LinkDB
All DBs
Position
22:28692258..28708057
Genome browser
AA seq
1017 aa
AA seq
DB search
MKLLKPSWISHNGKPIFSVDIHPEGTKFATGGQGEDSGKVVIWNMAPVLREEDEKNETIP
KMLCQMDNHLACVNCVRWSNNGLYLASGGDDKLIMVWKRAAYIGPSTVFGSSSKLANVEQ
WRCVTILRSHTGDVMDVAWSPHDAWLASCSVDNTIVIWNARKFPEIIATLRGHTGLVKGL
TWDPVGKYVASQADDRNLKVWRTMDWQLETSITKPFDECGGTTHVLRLSWSPDGQYLVSA
HAMNNSGPTAQIIERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSSPKPSCPYCCC
AVGSKDRSVSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMDGTVAYLDFSQD
ELGDPLNEDEKNSIHQKIYGKSLAITTEAQLPTTIIENPEMLKYQQQKQQAEQRSAASRE
AHTPKLTSVVNGESLEDIRKNLLKKQVETRTPDGRRRITPLCIAQLDTGDFSPALFNSVP
ILPGSSMSSQLTQQLTSSDSNTANSLSLKPCPEPTANAAPRPADDALHKEGVNATATTLS
AVANSVAVKPNSLTSAAKIEPMKALDSRFTERSKATPGVAVSSLVSLTPLDRVKDANALK
DPKPRITCLDSSSDSEEKMKAPSLALNKRKIEMEGGEVVEKRKKGRPRKDTKILPMSAAM
LQTAPTTDKDPPRVVVPMAVLKLPTPAPQKAFTLQVSSDPSVFIEVENEVSTAAGSRLSR
LKCNREGKVWETVLTSRVLTAAGSSDVIGVACEDRTLSVFSACGRRLLPAILLQAPMSTL
HCSGCYVMALTACATLSVWDVQKQSVLVKNESLQIILSGTDTTVSQSLLTRHGIPVVSLA
NGKSYCFNSALGTWNLIADKQDSLVQCADYRNCFPSQEAMLSSGPLAIVQGHSLNAGRQA
SRLSATPHLLQQGMTLAYLENQMASALTLKSSPEYRHWLLIYARFLVNEGSQYRLRELCK
DLLGPVHKSAASVWETTVLGLRKRDLLKEVLPVIGQNLQFQRLFTEYQDQLELLKNK
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgttgaagccaagttggatcagtcacaatggaaagccaatattttctgttgac
atccatccggagggaacaaaatttgcaacaggaggacaaggagaggattctgggaaagtt
gtcatatggaacatggccccagtcctccgagaagaggatgagaagaacgagaccattccc
aagatgctttgccagatggacaaccatttagcttgcgtgaactgtgtgcgctggtccaac
aatgggctgtacctggcttcaggtggggacgacaagctgataatggtgtggaaacgagca
gcgtacattggccccagcactgtgttcggctccagcagtaaactggccaacgtggagcag
tggagatgtgtaaccatactgaggagtcacactggagatgtcatggacgttgcttggtca
ccacatgatgcctggctcgcctcctgtagcgttgacaataccatcgtcatctggaacgct
cgcaaatttccagagatcatcgctaccctgcggggtcacactggcctggtgaaggggctg
acctgggaccctgtggggaagtacgttgcctctcaggccgacgaccgcaacttgaaggtg
tggcggaccatggactggcagctggaaaccagcataaccaaaccgttcgacgagtgtggt
ggaaccactcacgtgctgcggctcagctggtcccctgacggtcagtatctagtctccgct
cacgccatgaacaactccggccccacagcgcagatcattgagagggacggctggaagacc
aacatggactttgtgggccatcggaaagcagtgactgtagtgaaattcaaccctaagatt
ttcaagaagaagcagaagaacggcagctctcccaagcccagctgcccgtactgctgctgt
gctgtgggcagtaaggaccgctctgtgtctgtgtggctcacttgcctgaagcgccccctt
gtggttatccatgagttatttgacaagtcgatcatggatatctcatggaccctcaatggc
ctggggatcctggtgtgctccatggatgggactgtggcatacctggatttctctcaggat
gagcttggggatccactcaacgaggacgagaagaactcgattcaccaaaagatttacggg
aaaagcctggcgatcaccacagaggctcagctgcccaccaccatcatcgagaacccggag
atgctgaagtaccagcagcagaagcagcaggctgagcagaggagcgcggccagcagggag
gcgcacacgcccaagctcaccagcgtggtgaacggggagagcctggaggatatcaggaag
aatttgttgaaaaagcaggtggaaacaaggacaccagatggccgaagacggatcacccct
ctatgcattgctcagttagacacaggggacttctccccagccctgtttaacagtgtcccg
atccttcccggctcgtccatgtcctcccagctgacccagcagctgacctcctcggactcc
aacacggccaactccctcagcctgaagccgtgtccggagcccacagccaacgctgccccc
aggcctgcagacgatgcactgcacaaagagggcgtcaatgctacagccaccacattgtca
gccgttgcaaactccgttgcagtgaaaccaaactctctgacctctgctgccaagattgag
ccaatgaaagcacttgattccaggtttaccgaaagatcgaaagccacgcctggagtagct
gtatcctctcttgtcagcctcaccccccttgatagagtaaaagatgcaaatgctcttaag
gacccgaaacccaggattacatgtctggacagcagcagcgacagcgaggagaaaatgaag
gcaccgtctctggccttgaacaagaggaagatagagatggaggggggtgaggtggtcgag
aagagaaagaagggaagaccgaggaaagataccaaaatactgccgatgagtgcagccatg
ctgcagactgcgcccacaacagacaaagatccccccagagttgttgtgccgatggcagtg
ctgaagctgccaacgccagccccacagaaagctttcactctacaggtcagctcggatccg
tcggtgttcattgaggtggagaatgaggtctccactgccgcggggtccaggctgagcagg
ctgaagtgtaaccgcgagggtaaagtgtgggagacggttctcaccagtcgggtcctgact
gctgctggaagctcggacgtgatcggggtggcctgtgaggacaggacgttgtcagtattc
tctgcctgtgggcgccggctgctcccagccatcctgttgcaggctccaatgtccacactg
cactgttctggctgctacgtgatggccctcactgcctgtgccacgctgtcagtctgggat
gtgcagaagcagtcggtactggtcaagaatgaatcgctacagattattttgtcaggaaca
gataccacagtctcccagtccttgttgacccggcacggaatcccggttgtgagcctggcc
aatggaaagtcttactgtttcaactccgctctcgggacatggaatctgatagcagacaaa
caggactccctggtgcagtgtgcggattacaggaactgcttcccttcccaggaggccatg
ctgtcctctggacccttggccatcgtgcagggtcacagtttaaatgctgggaggcaagcg
tccaggctgtcagccacaccacacctcctgcagcagggaatgacactggcctacctagag
aaccagatggcatcggcacttacattgaaatccagtccggagtacaggcactggctgctc
atctacgcacggttcctggtaaatgaaggatcgcagtatcgcttacgagagctctgtaaa
gatttgttgggtcctgtacacaagtcagcggcaagcgtttgggagacgactgtgctggga
ctgaggaagcgagaccttctcaaagaggtgcttccagtaataggccagaatctgcagttc
cagaggctcttcacagaataccaggaccagctggagctgctgaaaaacaagtag
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