Polyodon spathula (Mississippi paddlefish): 121297371
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Entry
121297371 CDS
T07273
Name
(RefSeq) sphingomyelin phosphodiesterase 4-like isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00600
Sphingolipid metabolism
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121297371
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
121297371
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Gene cluster
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
121297371
NCBI-ProteinID:
XP_041079593
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All DBs
Position
22:complement(24605608..24616623)
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AA seq
823 aa
AA seq
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MASPPLQQSSFLLASLKADYLNKPFLQRCQDLVKVIDDYPAKELHLLFTWLVESVFGSLD
GSIVGWNLCFVQARTNEYNAIVEFLDPSGPMMKLVYKLHAEEYKYEFPISYLPGPVRASI
QEGVLPDCPIFHNKLQFPPSGLLSLSLSLNPFEYYMFYFAASLIVQRSYLPGQHFSPSDS
AYFVLVDSYLKYFLPTEGNVPPSLVPVVRGTVSPPPPRSPTVPFTGYGVHHTSLLKRHIS
HQPSMNADPAAQEIWRSETILQVFVEMWLHHYSLEMYQKMQCPQVKLELLQYRLGISSMH
CSTPTQSGYGTLHTYQEPFCPTEEHVLVVRLLVKHLHSFSSSQRPELITSSPSAHSHSSP
LEEFKRVVIPRFVQQKLYVFLQHCFGHWPLDTSFRAVLETWLSYLQPWRYTPEKQSPHMD
SQDRTVPDKWAAFVQENLLMYTKLFQGFLNRTIRTDLVNVNNALMVFRVAKVFAQPNLSE
MIQKGEQLFLEPEHVLHHRQHRFLTPSLGGSFLSSRQPFITDSVFKVKSHVYSLEGQDCQ
YKQMFGAEVRNTVLRLSQLIAQAKQTAKSISDHSAEAAANQSFLSWFGFESSDLNTSYVG
NDIDYMGLDSIKKTDEYLDRTLDYICQIFKLNAAQLSQLMVSFVSTQDDGGSKQLPDCIQ
GANGLLLTDLGRLQMINGLRKFDIDYQGDPELQPIRSYEIAVLVRLLYRLSSLINERFAG
EMQSLCSRQDFSGRLARYYLTASSVAQTSKRSPLTRRSLERRPQPRISLRYLASYRTLLS
IFMLYVISSFFGFGPVSFIFWGLLACFCYGVVMAMFADKRKTH
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggccagccctcctttgcagcagtccagcttcttacttgccagcctgaaagcagattac
ttgaacaagccttttcttcagcgctgtcaagatctggtcaaggttatcgatgactatcca
gctaaggagctgcacttgctcttcacctggctggtggagagtgtgtttggcagcctggat
ggcagcattgtgggttggaatctgtgctttgtgcaagcacggactaacgagtacaatgct
attgtggagttcctcgatcccagtggcccaatgatgaaactggtgtacaaattacatgct
gaggaatacaagtacgaatttccaatctcctatctcccaggtcctgtaagggcttcaatc
caggagggtgtcctgccagattgcccgattttccacaacaaactccaattcccaccttca
ggactcctgagcctcagcctctcgctcaatccctttgaatattacatgttttattttgca
gcaagcctcattgttcaaagaagctacctaccaggtcagcacttcagtccttcagacagt
gcttattttgtgctggttgacagttacctaaagtatttcttacctacggaggggaacgtt
ccaccttctcttgttccggtcgtcagaggaacagtgtcacctcctcctccaaggtccccc
acagtgccattcacaggctacggtgtccaccacaccagcctcctgaagcgccacatttca
caccagccctctatgaacgcagacccggctgcacaggagatctggaggtctgaaaccatt
cttcaggtgtttgtcgagatgtggcttcaccattactccctggagatgtatcagaagatg
cagtgtccacaggtcaagctggagttgctccagtaccgactcggtatttccagtatgcac
tgcagcactcccacccagtctggctatgggaccctccacacgtaccaagagcccttctgc
cctacagaggagcatgttctggtggtgagactcctcgtaaagcacctccattccttctcc
agcagtcagagaccagagctgatcacctcgtccccctctgcacactctcactccagccca
cttgaggagtttaaacgagttgtgatccctcgctttgtgcagcagaagctgtacgtgttc
ctgcagcactgcttcggtcactggccccttgacacttccttcagagcggttttagaaaca
tggttaagttacttgcagccatggagatatacccctgaaaagcagagcccccacatggac
agtcaggaccgcactgtgccagacaaatgggctgcctttgtgcaggagaatttgttgatg
tacaccaaactgttccaaggatttttaaacagaaccattaggactgaccttgttaacgta
aataacgcactgatggttttcagagtggcaaaagtctttgctcagcctaacctatcagaa
atgatccagaaaggtgagcagctgtttctggagccggagcatgtcctccatcacaggcag
caccgcttcctgacgcccagcctcggcggcagcttcctgtcctcacggcagcccttcatc
acagactccgtcttcaaggtgaagagtcacgtctacagcctggagggccaggactgccag
tacaagcagatgtttggagccgaagtgcgcaacacggtgttgcgactttcccagttaata
gcacaagccaaacaaacagccaaatccatatcggatcattctgcggaagcagctgctaac
cagtcattcctctcgtggtttgggttcgaatcttcagatctaaacacctcctatgtgggg
aacgacatagattatatgggactggacagcataaagaagactgatgaatacttggacaga
acactggactacatctgtcagatatttaagctgaatgcagctcagctgtcccagctgatg
gtgagttttgtgtcgacgcaggacgatggtggatcgaagcagcttcctgactgtatacag
ggagcaaatggattattgctaacagatctggggaggttgcagatgataaacggactgcgc
aagtttgacatcgactatcaaggagaccctgaattgcagccgataagaagttacgaaatt
gctgtgttggttcgtctcttgtatcggctgtcatctctgataaacgagcggtttgcagga
gagatgcagtcgctttgttcaagacaagattttagcggccggctagcccgttattatttg
actgcgtcgtccgtggcacagacgtcaaagcgaagccccttgacacgccgcagcctagag
agacgaccccagccacggatcagcctgagatacctggccagctaccgcaccctgctctcc
atcttcatgctctatgtaatatcttccttttttggctttgggcctgtgtctttcatcttc
tgggggctgcttgcttgtttttgttatggagttgttatggcaatgtttgctgacaagcga
aaaactcattaa
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