Polyodon spathula (Mississippi paddlefish): 121297374
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Entry
121297374 CDS
T07273
Symbol
vegfc
Name
(RefSeq) vascular endothelial growth factor C isoform X1
KO
K05449
vascular endothelial growth factor C/D
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04020
Calcium signaling pathway
pspa04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121297374 (vegfc)
04020 Calcium signaling pathway
121297374 (vegfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121297374 (vegfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121297374 (vegfc)
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Growth factors (RTK binding)
121297374 (vegfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
CXCXC
Motif
Other DBs
NCBI-GeneID:
121297374
NCBI-ProteinID:
XP_041079599
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All DBs
Position
2:complement(47603711..47675806)
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AA seq
405 aa
AA seq
DB search
MHLLELAPLVIFTILLQRDSAFESGHDYYDYEQDQEDTKDYPEPELEEQLRSVSSVDELM
KTVYPKYWNMLRCQSKSTGHLHFREKAASDTRTEDPLVFAAAFYNLDILKSIDTEWRKTQ
CMPREVCLDVGKEFGAATNTFFKPPCVSVYRCGGCCNNEGLQCMNISTSYISKTLFEITV
PLSQGPKPVTVSFANHTSCRCLSKLDVYRHVHSIIRRSLPECHAANKTCPKNHIWNNHIC
RCVKQHDFTFPSRYPGSYAFDGVNDICGPNKELDDETCQCVCKGSLSLSSCEPNRVLDRD
SCQCVCRLLPTSCGPSEVFDKDTCQCVCSKVCPRHQPLNPDKCTCECTESPNRCFLRGRR
FQHQTCSCYSPPCEGRRKRCEARFYFSEEVCRCVPTYWRRPAYTD
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcacttactggaattagctcctttagtgatctttactatattgcttcaaagagactct
gcttttgaatcaggtcatgattactatgattatgaacaggatcaagaggatacaaaggac
tatccagaaccagagctagaagaacagttgcggtctgtatccagtgtggatgaactcatg
aaaacagtctacccaaaatattggaatatgttaagatgtcagtcaaagagcaccgggcat
ctgcacttcagagaaaaagctgcctccgacacaaggactgaggatcccttagtatttgca
gcagccttttacaatcttgacattttaaaaagtattgatactgagtggagaaagacccag
tgcatgccacgagaggtttgtttagatgtgggaaaagagtttggggcagcaacaaacacc
ttctttaaaccaccctgcgtgtctgtctacagatgtgggggctgctgcaacaacgaagga
cttcagtgcatgaacattagcacatcatatatcagcaaaacattgtttgaaattacagta
ccactgtctcagggaccaaaaccagtgacagtgagctttgccaatcatacatcttgccgc
tgcttgtccaaactggatgtttatagacatgtgcactcaatcattagacggtctctacca
gaatgtcatgctgcaaataagacctgtccaaagaatcacatctggaataatcacatctgt
agatgtgtgaagcagcacgacttcacttttccttcacggtatccaggatcttatgcattt
gatggagtcaatgatatttgtggacctaataaagagctagacgatgagacttgccagtgt
gtctgtaagggtagcttgagcctctctagctgtgaacccaacagagtactggatagagac
tcctgccaatgtgtgtgcagactgcttccaacgtcatgtggacccagtgaagtttttgat
aaagacacatgccagtgtgtttgttcaaaagtctgcccaagacatcagccgctgaatcct
gataaatgtacatgcgaatgtacagaatcaccaaatagatgctttttgagaggaagaagg
tttcaacaccagacatgcagttgctacagcccaccttgtgaaggtcgaagaaagcgctgc
gaggcaagattttacttcagtgaggaggtttgccgctgtgtaccaacgtactggagaaga
ccagcatacacagattaa
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