KEGG   Polyodon spathula (Mississippi paddlefish): 121297380
Entry
121297380         CDS       T07273                                 
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform X1
  KO
K14411  RNA-binding protein Musashi
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    121297380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pspa03019]
    121297380
Messenger RNA biogenesis [BR:pspa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     121297380
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 NID Nup35_RRM_2
Other DBs
NCBI-GeneID: 121297380
NCBI-ProteinID: XP_041079608
LinkDB
Position
22:27917477..27941526
AA seq 361 aa
METEGSQTSLSSPDSPHDPCKMFIGGLSWQTTQEGLKEHFRKFGDVKECMVMRDPVTKRS
RGFGFVTFVDQTGVDKVLAQPRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT
TIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASRGYTGLTPGYT
YQFPEFHLERTPLLTSPHPSEMTAIPLTAYGPMAAAAAAAAVVRGAGRGCCFVLSPGSAQ
TRTGGFLGTSSPGPMAELYAAANQDSGVGSYISAASPAPSTGFGHSLGGQLIATAFTNGY
H
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggagacagaagggagccagactagcctgtcctctccggattccccccacgacccctgc
aaaatgttcatcgggggtttgagttggcagaccacgcaagagggactcaaggaacatttc
agaaaattcggggacgtgaaggagtgcatggtaatgagagatccagttacaaagcgatca
agggggttcggattcgttactttcgtagatcagactggcgtagataaagttctggcacag
cccagacacgaactggattccaaaaccattgacccaaaagtggcgttcccccgtcgagca
cagcccaagttagtgacccggacgaagaagatctttgtgggtggcctgtctgtcaacacc
accatcgaggacgtcaagcagtacttcgatcagttcggcaaggtggatgatgccatgctg
atgttcgacaagacgaccaacagacacagaggttttgggtttgtgacatttgaaaacgaa
gacgttgtagagaaagtgtgcgagattcacttccacgaaatcaacaacaagatggtggag
tgcaagaaggcccagccgaaggaagtgatgtcaccgactggctctgccagggggcggtcc
cgagtgatgccgtacgggatggacgcgttcatgctgggaatcggcatgctgggttaccca
gggttccaagctgctacctatgccagtcgcggctacactggcctcactcctggctacacc
taccagtttcccgaattccatttagagaggacccccctcctgacttcaccccacccctct
gagatgacagcgatccccctgacggcgtatggaccaatggcggcggcagctgcagcggct
gcagtggtgagaggtgcaggtagggggtgctgttttgttctctcaccaggctccgcccag
actcgcactgggggcttccttggcaccagcagccccggccccatggctgaactgtatgcc
gcagccaatcaggactctggagtcggcagttacatcagcgctgccagccccgcccccagc
actgggtttgggcacagcctggggggccaattgattgccacagctttcacaaacggctac
cactga

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