Polyodon spathula (Mississippi paddlefish): 121297386
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Entry
121297386 CDS
T07273
Name
(RefSeq) rabphilin-3A-like isoform X1
KO
K19938
rabphilin-3A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121297386
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121297386
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FYVE_2
PI3K_C2
JetD_C
Motif
Other DBs
NCBI-GeneID:
121297386
NCBI-ProteinID:
XP_041079621
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All DBs
Position
22:complement(23354151..23430145)
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AA seq
743 aa
AA seq
DB search
MTDTVFGNSSDRWVCPNDRQLTLRANEKEQIGTGWSVHSSQTERQRKNEELTDEEKAIIN
SVIARAEKMEAMEQERIGRLVDRLDYMKKNALGDGVSRCVLCGEQLGMLGAAAVVCEDCK
KHACTKCGIQCSSRPGSIWLCKICSEQREVWKRSGAWFFKGLPKQVLPSPMPIGEEKEPK
KAGSTEPPVQEQRASSYPRAQVRGPAEAPPQLTEQHPQGEPEERRAGGRRSVKSRDASHH
ETDRGGYSSEEDGAVGAYRGARKGMRPQRSEAGTESTGRGGYPPVARKPQELRSAPSGSE
YGTGDPEGRDSYHNKAESEVNRSPVAVKRANSVQASRPAAAPSAMAQPGGRVAQNPPSRY
AEQKQGGQPMAPGQMDSGYLITPQRDERAAAPVKEERRQSAPYTPVSAPLAQAPPARHQP
PPPPPEEDEEEANSYDSDETTTLGALEFSLLYEQESSSLYCTIIKAKGLKPMDSNGLADP
YVKLHLLPGASKSNKLRTKTLRNTRNPTWNETLVYHGITDEDMQRKTLRISVCDEDKFGH
NEFIGETRMPLKKLKLNQKKNFNICLERVIPMKRGGTVGSSRGIALYEEEADHSGEVEER
GRILVSLMYSTQLGRLIVGIVRCVHLAAMDANGYSDPFVKIWLKPDMGKKAKNKTQIKKK
TLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGITAKGEYLKHWYEC
LKNKDKKIERWHTLVNANHVSSD
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgacggacacggtgtttgggaacagttcggaccgctgggtctgtcccaacgacaggcag
ctcaccctccgagccaatgaaaaggaacagatcggaacgggatggtcagtccactccagc
cagaccgagaggcagaggaagaatgaggagctgactgatgaggagaaggcgatcatcaac
agcgtgatcgccagggctgagaagatggaagccatggagcaagagcgcattgggcggctg
gtggatcgtttggattacatgaagaagaacgcgttgggggatggggtctcgcgctgcgtt
ctatgcggggagcagcttggcatgctgggggctgccgctgtcgtctgcgaggactgtaag
aagcacgcctgtacaaagtgtggaattcagtgcagcagtcgacccggctccatatggctg
tgcaagatctgtagtgagcaaagggaggtgtggaagcgctctggggcctggttcttcaag
ggcttgcccaagcaggtcctgccctccccgatgccgatcggtgaggagaaagagccgaag
aaagccggctccactgagccccctgttcaggaacaaagagccagcagctatccgcgggca
caggtccgaggcccagcagaggctccccctcagctcacagagcagcatccccaaggtgag
ccagaggagaggagagctgggggcaggagatcagtgaaatctcgtgatgccagccaccac
gaaactgatcgagggggatacagctcggaggaggacggggctgtcggtgcctatcgaggt
gccaggaaaggaatgagaccacagaggtccgaggccggcacagagagcactggcagagga
ggctaccccccggtggcccggaagcctcaggagctgcgctccgcccccagcgggagcgag
tacggcacgggggatcccgaaggccgagactcctaccacaacaaagccgaaagtgaggtc
aataggagccctgtagctgtaaagcgagccaactctgtccaggcctccagaccagctgca
gccccctctgcaatggctcagccaggtggcagagtagctcagaacccgccttctcgatac
gctgaacagaagcaaggaggtcagcccatggctccgggacagatggacagtggctatttg
atcacgccacagcgggacgagagagctgccgccccggtcaaggaggagaggaggcagtcg
gccccctacacccctgtctcagcccccctagcacaagcccccccagcccggcaccagccc
cctcctcctccccctgaggaggatgaagaagaggccaacagctacgactcggacgaaacc
acaactctgggtgcgctggaattcagcctgctgtatgaacaggagagcagttcattgtac
tgcaccatcataaaagccaagggattaaagcccatggactccaatgggctggcagacccc
tatgtcaaactgcacctgttgcccggagccagtaagtcaaacaagctgcgcaccaagact
ctgagaaacactcgcaatcccacctggaatgagactctggtttaccatgggatcacagac
gaggacatgcagagaaaaacactgagaatctctgtgtgtgacgaggataaatttggacac
aatgagtttattggagagaccaggatgcccctgaagaagctgaagttgaaccagaagaag
aacttcaacatctgtctggagagagtcatccctatgaaacgtggaggaacagtcggctct
tcacgtggcattgctctctatgaggaagaggcagatcacagtggagaggtggaggagcgg
ggaaggatcctggtctctctcatgtacagcacccagctggggaggctgattgtgggcatc
gtccgctgtgtgcatctggcagccatggacgccaacggctactcggaccccttcgtcaaa
atctggctaaagccagacatggggaagaaggctaaaaacaagacccagattaagaagaag
actttgaatcctgagttcaatgaggagtttttctatgacatcaaacacagtgacctggct
aagaagtctctcgatatctcagtgtgggattatgatattggcaaatccaatgattatata
ggaggatgccagctgggcatcacagccaagggggagtacctgaagcactggtatgagtgt
ctgaagaacaaggataagaagattgagcgctggcacacccttgtgaacgcgaaccacgtc
tctagcgactag
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