Polyodon spathula (Mississippi paddlefish): 121297434
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Entry
121297434 CDS
T07273
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30-like isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121297434
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121297434
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121297434
04121 Ubiquitin system [BR:
pspa04121
]
121297434
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121297434
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121297434
Membrane trafficking [BR:
pspa04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
121297434
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121297434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
121297434
NCBI-ProteinID:
XP_041079690
LinkDB
All DBs
Position
22:26774552..26781372
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AA seq
506 aa
AA seq
DB search
MQCRLEAADRLAREFVRTGSAVRNKMVKNWGVIGGVAAAVAAGVYVLWGPVTERKKRKKG
MVPGLLNLGNTCFMNSLLQGLAACPSFIRWLEEFTGGYNQDQNQQQQHPKLARTLLQLLK
ALSTQELAEGDVLDAGKLLEVLRSYRWKISSFEEQDAHELFHVLTSSLEEEERDRHPHIT
HLFDVQSLESAAWMDEKNLSCRSRGPLHPLPNSWQSQHPFHGRLTSNMVCKHCDQQSPVR
YDSFDSLSLTIPTTTWGRPVTLDHCLQHFISSETIKDVECENCTKIHAGGLLNGQVVESQ
RSTFIKQLKLGKLPQCLCIHLQRLTWSSQGTPIKRQEHVHFTEFLSMDSYKHRTAGQRSQ
RQNRAARPSIPEDTRVSPKTSDPDQSNNKKPLTNGACSGYLPTSTTSPPFALTYECSSSA
YLFRLTAVLVHHGDMHSGHFVTYRRSPPSPKNPSAFSSQWLWVSDDSVRKANLQEALSSN
AYLLFYERVRPAPTLLRPSPRLIPKE
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcaggctggaggccgcagacaggctcgccagggagtttgtgaggacgggatct
gctgtcagaaataaaatggtgaaaaactggggagtgattggtggcgtagcagccgccgtg
gctgctggagtttatgtgctctggggacccgtcacagagagaaagaaacggaagaaaggc
atggtacctgggctcctgaacttggggaacacctgctttatgaactccctgcttcaaggc
ttggcggcgtgtccctcctttatccgctggctggaggagttcacaggggggtacaaccaa
gaccagaaccagcagcaacagcaccccaagttggccagaacactcctgcagcttctcaag
gcgttgtccacgcaggagctggcggaaggtgatgtcctggatgcagggaagctgctggag
gtcctcaggagttacagatggaagatcagctcatttgaagagcaggatgcacatgagctc
ttccacgtgctcacttcctctctggaggaggaggagcgggacaggcacccccacatcact
cacctgttcgatgttcagtctctcgagagcgccgcatggatggatgagaaaaacctcagc
tgcaggagtcgaggacctttgcatccattaccaaactcatggcaatcccagcatcctttt
catggacgactgaccagtaacatggtgtgcaagcactgtgaccaacagagtccagtccgg
tatgattcatttgacagcctctcgctcaccattcctacgacaacttggggccggcctgtg
acgctggatcactgcctccaacatttcatctcttcagagacgatcaaagatgtggagtgt
gagaattgcaccaagatccatgcaggtggattgttaaatggacaggttgtggaaagccag
aggtcaacttttatcaagcagctcaaactggggaagctgccccagtgcctgtgtattcac
ctgcagaggctgacctggtccagccaaggcacgcctatcaagcggcaggagcatgtgcac
ttcacagagttcctgtccatggactcctacaagcacagaacggcgggtcaaaggtcacag
cgacagaaccgggcagccaggccgagcattccagaggataccagggtgtctcccaaaacc
tcagatccagaccaatcaaacaacaaaaagccactgacgaatggagcgtgctcaggatac
ctccccacctccacaacaagtcccccatttgccctgacctatgagtgcagttcgtctgcc
tatctcttccgattgacagctgtgttggtacatcacggggacatgcactcaggacacttt
gtcacctaccgccgctcccctccctctcccaagaacccctccgccttcagcagccagtgg
ctgtgggtgtctgacgactctgtacgcaaggccaacctgcaggaggcactctcctccaac
gcctacctgcttttctatgagagggtccggccagcccccacccttctgcgcccaagcccg
aggctgatccccaaggagtga
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