Polyodon spathula (Mississippi paddlefish): 121297445
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Entry
121297445 CDS
T07273
Symbol
pdlim4
Name
(RefSeq) PDZ and LIM domain protein 4
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121297445 (pdlim4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121297445 (pdlim4)
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121297445 (pdlim4)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
121297445
NCBI-ProteinID:
XP_041079705
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Position
22:3650751..3676461
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AA seq
332 aa
AA seq
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TLNGPSPWGFRLVGGKDFSTPLTISRITPGSKAAQADLCPGDIILSINGDHTESMTHMEA
QNRIKACADQLILSINRSETKIWSPTVTEDSRANPFKFSLESEPQDFGPFRSGHNRRPAP
FVHDGPMNNGSSKPNAQYNNPMGLYANNNNNNNETSLPKQIGRLSISSPQSPEPRIHSPN
PRNGVDTESDVYKMLQHSDYESSSEPKQSGSFRYLQGILDAEDTGEKPERPAVTKSVKSP
VHKVGSSVPGLQKLPECTRCGNGIVGTIVKARDKLYHPECFMCDDCGLNLKQRGYFFIEE
RLYCENHAMARVQPPEGYDVIAVYPNSKVELV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
actctaaatggaccctcgccctggggtttcaggctcgtgggtggaaaggattttagcaca
cctttaacaatttcaaggatcacccctggaagtaaagctgctcaggctgacctatgccca
ggagatatcatcctctctataaatggagaccatactgaaagcatgacacatatggaggct
cagaacaggatcaaggcgtgtgctgaccagctcattctatcaatcaacaggtccgaaaca
aagatttggtctccaactgttacagaagacagcagagcaaatccttttaaattcagcttg
gagtcagaacctcaggattttgggcctttcagaagtggacacaacagaagaccagccccc
tttgtgcatgatgggcctatgaataatggcagttcaaaaccaaatgcacagtacaataat
cccatgggactttatgcaaacaacaacaacaacaacaacgaaacctctttgcccaagcaa
ataggcagactcagtatcagttctccacagagtccagaaccacggatacattccccaaac
cccagaaatggtgttgacacagagtctgacgtctacaagatgcttcagcatagtgattat
gagtcatcatcagaaccaaagcagtctgggtccttcagatatttacagggaatacttgat
gctgaggatactggcgaaaaaccagaaagaccagccgtcaccaaaagtgtgaaatcccca
gtacataaagtgggtagcagcgtgcctggactgcagaagctccctgagtgtaccagatgt
gggaatggcattgttggtacaatagtgaaagcacgggacaagctttaccaccccgagtgc
tttatgtgtgacgactgtggcttgaacctgaaacagcgcgggtatttcttcattgaagag
cggctctactgtgagaaccatgcaatggctagagtccagcctccagagggttatgatgtc
atagctgtttaccccaactctaaagtcgaactggtctaa
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