Polyodon spathula (Mississippi paddlefish): 121297452
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Entry
121297452 CDS
T07273
Symbol
abcb9
Name
(RefSeq) ATP-binding cassette sub-family B member 9 isoform X1
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa02010
ABC transporters
pspa04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121297452 (abcb9)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
121297452 (abcb9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121297452 (abcb9)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121297452 (abcb9)
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
121297452 (abcb9)
Transporters [BR:
pspa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
121297452 (abcb9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_30
AAA_22
ABC_ATPase
AAA_16
AAA_29
RsgA_GTPase
AAA_21
nSTAND1
AAA_15
Motif
Other DBs
NCBI-GeneID:
121297452
NCBI-ProteinID:
XP_041079714
LinkDB
All DBs
Position
22:26024843..26031838
Genome browser
AA seq
792 aa
AA seq
DB search
MKAVTAVGCSLLFTVLDMTLTTLLYLRGAHIERFVQDLNFFDVYRSVVDLWAVSLVRSSL
LMGAAVGVSKNTTEGPKRVKDLETFAIVVCLLIGMYSVVKLLLYTEVMESLNDPWFLCLV
AWTCVSALATFLAWKLLSLVQPVREATFSISSEAASPEETEHLLDSEEDRSKGVKKDTAS
PATIGRLLSYSKHDAALLGLAFLFLIVAAVGETFIPYYTGLAVDAIVIQKDMKAFSKFMI
IMSVFAIVSSFAAGVRGGVFSLALARLNVRIRNLLFRSLVRQEIGFFDATHTGDITSRLS
SDTTMVSDLISLNVNICLRSLVKGVGVCTFMFTLSWKLSLVTFMGFPFIMLVSKFYSKYY
KRLAREVQDALAKANNIAEETVSAMKTVRSFANEEAEAGVYWEKLQQMYKLNRTQALAYA
CYMCSSSLTVLALQVSILYYGGHLIVSGHLTSGNLISFIIYELELGDCMENIGAVYTGLM
QGVGAAEKVFEFIDRKPQLSSDGTLAPDTLKGLVEFKNVTFSYPTRPESQVLKGVSFTLH
PGQVTALVGPSGSGKSSCVSLLEHFYRAQTGQVLLDGNPIEEYDHRYLHTKVSLVGQEPV
LFARSVQENIAYGLTDCSLEEVIQASMKANAHGFITELPGGYSTDAGEKGTQLSGGQKQR
VAIARALVRSPQVLILDEATSALDAESEHIVQQALNGIMQDRTVLVIAHRLSTVEKAHNI
IVIDKGRVLEQGTHKDLMQKEGLYSKLVKRQILGIETGTETMNQVTSNPPNRLRKQRESK
RKSSESDEELRI
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagtgactgctgtgggatgcagtcttttatttactgtgctcgacatgacactc
accacgctcctgtacctccgtggagcgcatatagaacgctttgtacaggacctgaacttc
ttcgatgtgtaccgatctgtggtggatctgtgggcagtctccctcgttaggtcttcctta
ctgatgggtgctgctgttggggtttccaaaaacaccactgagggtcccaagcgggtgaag
gacttggagacttttgcaattgtcgtgtgcctgctaataggcatgtactctgtggtcaag
ctgctgctgtatactgaagtcatggagtcactgaatgatccctggttcctctgcctggtt
gcatggacttgtgtctctgcccttgccactttccttgcatggaagctgctttctttagta
cagccggtgagggaagcaaccttcagcattagctcggaggctgccagcccagaggagaca
gaacacctgctggattcagaggaggacagaagcaaaggtgtcaagaaagacactgcatct
ccagcaacaataggcaggctcttgtcatactcaaaacatgatgctgccttgctgggacta
gcttttctgtttctcattgttgctgctgtaggcgaaacctttatcccctattacactgga
ctggcggtcgatgcgatcgttattcagaaggacatgaaagccttctccaaattcatgatt
attatgtcagtgtttgccattgtaagttcttttgcggcaggggttcgaggtggggtgttc
tctcttgccctcgccaggttaaacgtccgaatccgcaacctgctcttcagatccctggtc
cgccaagaaatcggattctttgacgcgactcacacaggggacatcacctctcgcctgagc
tcggacacgacgatggtgagtgacctgatctctctgaacgtgaatatctgcctgcgcagc
ctggtgaagggggtgggggtgtgcaccttcatgttcaccctgtcctggaagctctctctc
gtcaccttcatgggcttccccttcatcatgctggtctccaagttctacagcaaatactat
aagaggcttgcccgcgaggtccaggatgccctggccaaagcgaacaacatcgcggaggag
accgtctcagccatgaagacggtgcggagcttcgctaatgaggaggcagaggcaggcgtg
tactgggagaagctgcaacagatgtacaaactcaacaggacgcaggcacttgcctatgcc
tgctacatgtgctccagcagtctaactgtgctcgccctgcaagtcagtatcctttactat
ggtggccacctgatagtctctggacatttgaccagcgggaacctcatttccttcatcatc
tatgagctggagttaggggactgcatggagaacattggtgcggtgtacacggggctaatg
cagggagtcggagctgccgagaaggtctttgagtttatcgaccgcaagccccagctgtcc
agtgatgggaccctggcccccgacactctcaaagggcttgtcgaattcaagaatgtcact
ttctcctaccccacacgccccgagtcccaggtcttaaagggcgtgtccttcactctgcac
ccaggccaggtcacggctctggtgggcccttcgggaagtggaaaaagctcttgtgtgtca
ttactggagcatttctacagagcacagaccggccaggtgctgctggatggaaatcccatc
gaggagtatgaccacaggtacctgcacaccaaggtctctctcgtgggccaggagccagtg
ctgtttgcccgctctgtgcaggagaacatcgcgtatggcctgacggattgctctctggag
gaggtcattcaggcttcaatgaaggccaacgcccacgggtttatcacggagctgcccggc
gggtacagcacagatgctggtgagaaaggcacacagctctccggtggtcagaagcagcgt
gtggcgatcgctcgcgctctcgtacgaagcccccaagtcctcatactggatgaagccacc
agtgcactagatgctgaaagcgaacatattgttcagcaggctctgaatggtatcatgcag
gaccgcacggtgctggttatagcacaccgcctgagcactgtggaaaaagcccacaatatc
attgtgatagacaagggcagggtgttggagcaggggacgcacaaagacttaatgcagaag
gaaggtctgtactccaagctggtgaagagacagatcctggggatagagactgggactgag
accatgaaccaggttacaagcaatccaccgaacagacttcgaaaacagagagagtcaaaa
aggaagagcagtgagtcagatgaagagttgcgcatctga
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integrated database retrieval system
