Polyodon spathula (Mississippi paddlefish): 121297457
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Entry
121297457 CDS
T07273
Name
(RefSeq) histone deacetylase 3
KO
K11404
histone deacetylase 3 [EC:
3.5.1.98
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121297457
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121297457
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
121297457
HDAC complexes
SMART complex
121297457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
121297457
NCBI-ProteinID:
XP_041079724
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All DBs
Position
22:1669223..1676576
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AA seq
428 aa
AA seq
DB search
MSNRTAYFYDPDVGNFHYGGGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCR
FHSEDYIDFLQKVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGAIQLNH
KICDVAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEA
FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRLLFQPVI
KQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFKIPLLVLGGGGYTV
RNVARCWTYETSLLVEEPISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ
TVFENLKMLNHAPSVQIHDVPSDLLSYERTDDPDPDERGSEDNYSRPEASNEFYDGDHDN
DKESDVEI
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacaggaccgcttatttctacgatcccgacgtgggcaactttcattatggtgga
gggcaccccatgaagccacaccgcctgtctctcacccacagcctggtcctgcactacggg
ctctacaagaaaatgatggtgttcaagccgtacaaggcctctcagcatgacatgtgccgc
ttccattcggaggattacatcgacttcctgcagaaggtcagtcccaacaacatgcagggc
ttcaccaagagtctgaacgccttcaacgtgggagacgactgtcctgtgtttccaggattg
tttgagttctgttcaaggtacacaggagcctcgctgcagggagccatacagttaaatcac
aagatctgtgatgtcgctattaactgggctggaggcctgcatcatgcaaaaaaatttgaa
gcatctggtttctgctacgtgaatgacattgtcatcagtatactagagctgctgaagtac
cacccccgcgttctctacattgacatcgatattcaccatggcgatggggtacaggaagct
ttttacctcaccgaccgtgtcatgactgtatccttccacaagtatgggaactactttttc
ccagggacaggtgacatgtacgaggtgggagctgagagtggccggtattactgtctgaat
gttcctcttcgagatggaatagatgatcagagctacagactcctctttcaaccggtgatc
aaacaggtggtagacttttatcagcctacttgtattgttctacagtgtggggctgattct
ttaggctgtgacagactgggctgctttaacctcagcataagaggacacggggagtgtgtg
gagtttgtgaagagttttaaaatccccctgctggtgctgggaggtggagggtacacagtc
cgcaacgttgcacgatgctggacgtatgagacctcgctgctcgttgaagaaccaataagt
gatgaactgccttatagtgagtactttgagtattttgctcccgatttcacgctgcacccg
gacgtcagcaccaggatagagaaccagaactccagacagtacctggatcagatccgacag
accgtgtttgaaaacctgaagatgctgaaccacgcgcccagcgtccagatccatgacgtt
ccctcggacctgctgagctacgagcgcactgacgatcccgaccctgatgagaggggctcc
gaggacaactactccaggccagaggcatccaatgaattttatgatggtgaccatgacaat
gacaaagagagcgatgtggagatctga
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