Polyodon spathula (Mississippi paddlefish): 121297513
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Entry
121297513 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130-like
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121297513
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121297513
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121297513
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
121297513
NCBI-ProteinID:
XP_041079796
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All DBs
Position
22:9043847..9089006
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AA seq
392 aa
AA seq
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MLKKWSAAIIWNCVSAVLVLTVLPRCVLPAQTDSSPNKDGPAVQIPALLNVTLLDSNGNS
PKLVWRIEGQYGQDSPKTEAKGTIIAPVPINGVADRLGCDRQTRFLVPPNTKHWVALLHR
GNCTFKEKILRAAAFNASAVVIYNNMSKEETITMAHTGTGDIVVVMITHFCLSIQIVVIL
QCAFLLTFGSRKLHKLLFFFFLFQRQLGDAAKKAISKLSTRTVKKGDKETDPDFNHCAVC
IEGYKLNDVVRILPCKHVFHKMCVDPWLNEHCTCPMCKLNILKALGIMPNLPCVDNVAFD
MDMISRSQTSSQRSILGDSTNENSISLEPLRQSGTSQIPLEAELTPRSGEINIAVTKEWF
IIAIFGLLSVLTLCYMIIKATFSYSTNVGEWC
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagtggtcagctgcaattatatggaactgtgtctccgccgtgctggtgttg
actgtgctgcccaggtgtgtgttacctgctcagacagacagctctcccaacaaggacgga
cctgccgttcaaattcctgctttgttgaatgttaccctcttggattccaacgggaactca
cctaagcttgtctggagaattgaggggcagtacggccaagattcccccaagactgaagct
aaaggaacgataatagcaccagtacccattaatggagttgcagaccgtctgggttgtgac
cgtcagactcgcttccttgtccctcccaataccaagcactgggttgcactgctgcataga
ggaaactgtaccttcaaggagaagatcctgagagcggccgccttcaatgcctctgctgtc
gtcatctacaacaacatgtccaaggaagagaccatcaccatggcgcacacaggtaccgga
gacattgtggtggtgatgatcacacatttttgcttatctatccaaatagtcgttatactt
caatgtgcatttctgttaacgtttggttccaggaagcttcataaattactattttttttt
tttctgtttcagcgccagcttggagatgcagctaaaaaagccattagcaagctttccact
cggactgtgaagaagggtgacaaggaaacagacccagactttaaccactgtgcagtttgc
attgaaggatacaaactaaatgatgtagtccgcattctgccttgcaagcatgtcttccat
aaaatgtgtgtggacccctggctgaacgaacactgtacctgccccatgtgcaagctcaac
attctcaaggccctcgggattatgccaaacctaccctgtgtggacaatgttgcctttgac
atggacatgatatccagaagtcagacgtccagccagagatcaattctaggagattcgacc
aatgaaaactcaatcagcctcgagcccctgagacagtctgggacgtcccagatccctttg
gaggctgagctgacgcctcgctctggagagattaacatcgccgtcaccaaagagtggttt
attatcgccatctttggcctgctcagtgtccttactctctgctatatgatcatcaaagcc
acttttagctactctacaaatgtaggcgagtggtgttga
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