Polyodon spathula (Mississippi paddlefish): 121297567
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Entry
121297567 CDS
T07273
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00061
Fatty acid biosynthesis
pspa00071
Fatty acid degradation
pspa01100
Metabolic pathways
pspa01212
Fatty acid metabolism
pspa03320
PPAR signaling pathway
pspa04146
Peroxisome
pspa04216
Ferroptosis
pspa04920
Adipocytokine signaling pathway
Module
pspa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121297567
00071 Fatty acid degradation
121297567
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121297567
09143 Cell growth and death
04216 Ferroptosis
121297567
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121297567
03320 PPAR signaling pathway
121297567
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pspa01004
]
121297567
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121297567
Enzymes [BR:
pspa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121297567
Lipid biosynthesis proteins [BR:
pspa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121297567
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of breast milk
121297567
Exosomal proteins of breast cancer cells
121297567
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121297567
NCBI-ProteinID:
XP_041079864
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All DBs
Position
22:3765603..3792789
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AA seq
722 aa
AA seq
DB search
MIAFVLVSGSIWMVLEISNTLIEKMQAQEILRSLRLPELQEFSQFFRSLPAPTLVGIGAL
AAVIAYWLATRPKAMKPPCDLTRQSEEVERYAGARRSVLGDNPKLLTHYYDDARTMYEVF
HRGLHIAGDGPCLGSRKPNQPYEWLSYREVSDRAQCLGSGLIFQGCRPCPEQFIGVFAQN
RPEWIISELACYTYSMVVVPLYDTLGPGAIRYIINTAEISTVICDKPEKASILLENVETL
QTPGLKIIILMDPFDPGLVERGDRCGVHIQSIKDVEALGRVHHKVSVPPQPDDLSIVCFT
SGTTGNPKGVMLTHGNVVADFSSFLKVTEKVIFPRQDDVLISFLPLAHMFERLIQSVVYC
HGGRIGFFQGDIRLLSDDMKALRPTIFPVVPRLLNRMYDKIFSQANSPVKRFLLEFAAKR
KAAEVRSNIIRNDSLWDRLFFGKIQASLGGRVRMIVTGAAPASPAVLGFLRAALGCQVYE
GYGQTECTAGCTFTTPGDWTSGHVGAPLPCNLIKLVDVEEMNYFASKGEGEVCVKGPNVF
KGYLKDPEKTAEALDEDGWLYTGDVGKWLPNGTLRIIDRKNHIFKLAQGEYIAPEKIENI
YIRSEPVAQVYVHGHSLQSCLVGIVVPDPEVMPPWARKKGFKGQYGELCKDKDLKKAIME
DLVRLGKASGLHSFEQVKDIYIHTEMFSIQNGLLTPTLKAKRPELRDYFKERIEELYANI
SM
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgattgccttcgttctagtctctgggtccatttggatggttttagagattagtaacacg
ttgattgagaagatgcaggcccaggagatcctgaggagcctgcgcctgcccgagctccag
gagttcagccagttcttccgcagcctgcctgcccccacactggtcgggattggggctctc
gccgctgtcattgcttactggctggccaccagacccaaggccatgaaacctccctgcgac
ctcacaaggcagtccgaggaagtggagcgctacgctggtgcacgccgctctgtcctgggt
gacaatcccaagctgctaacacactattacgatgatgcgagaacgatgtacgaggtgttc
caccgagggctgcacatagcaggtgatggtccttgtctgggctccagaaagcccaatcaa
ccttatgaatggctgtcatacagggaggtttcagacagggctcagtgcctgggctcgggg
ttgattttccagggatgcagaccttgtccagagcagttcattggggtctttgcacagaac
agaccggagtggattatctccgagttggcttgctatacctattctatggtggttgtgcca
ctttacgacactctaggaccaggggcaatccgctatattattaatacagctgagatttct
acagttatatgcgacaagccggagaaggccagtatcctcttggagaatgtggagacgctg
cagaccccagggttgaagattatcattttaatggacccgtttgaccctggccttgtagag
aggggagacagatgcggggttcacatccaatccattaaggacgtggaggcgctggggaga
gtgcaccataaagtttctgtgcctcctcaaccagatgatttatccattgtgtgttttact
agtggaacaacaggaaaccctaaaggtgtcatgctgactcatgggaatgtagtagctgat
ttttccagctttctgaaagtcactgagaaagtgatctttcccagacaggacgatgtgctt
atctccttcctgcctcttgctcacatgtttgagagacttattcagtctgtagtttactgt
cacggaggaaggattgggttcttccaaggagacatcaggctcctgtctgatgatatgaag
gcactgcgcccgacaatcttccctgtggtacccaggctgctcaacagaatgtatgacaag
atctttagccaggcaaacagcccagtgaagcgctttcttctggaatttgcagcaaagaga
aaagcagcagaagttcgaagtaacattatccggaatgatagtctgtgggacagactcttc
tttggcaaaatccaggctagtctgggaggccgggtgcgaatgattgtcacgggagcagct
ccagcttctcccgccgtgctggggttcctgcgggcagcgctggggtgtcaggtctatgaa
ggttatggtcaaacagagtgtaccgctggatgcaccttcaccacacctggagactggaca
tcaggtcatgttggagctccactgccctgcaatcttatcaaactggtggacgtggaggag
atgaactattttgcttccaaaggcgagggagaggtctgtgtgaaaggaccgaatgttttc
aagggctacctcaaagacccggagaagactgcagaggcgttggatgaggacggatggctg
tacactggggatgttgggaaatggttaccaaatggtacgttaagaataattgatcggaag
aatcatatctttaaactggcccagggagagtatatcgccccggaaaagattgaaaacatt
tacatccggagtgagccagtcgcccaggtgtatgtccatgggcacagtttacagtcctgc
ttggtgggtattgttgtacctgacccagaagttatgccaccctgggcaaggaaaaaaggc
ttcaagggacagtatggagagctgtgtaaagataaggaccttaagaaagcaataatggaa
gatttggtccgattgggaaaggcaagcggacttcattcatttgagcaggtcaaagacatc
tacatccacactgaaatgttctccatacaaaatggtcttttgaccccaacattaaaggca
aagcgaccagaactgagggattattttaaagaaagaatagaagagctttatgccaacatc
tctatgtaa
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