Polyodon spathula (Mississippi paddlefish): 121297570
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Entry
121297570 CDS
T07273
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121297570
04082 Neuroactive ligand signaling
121297570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121297570
Ion channels [BR:
pspa04040
]
Ligand-gated channels
GABA-A
121297570
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
121297570
NCBI-ProteinID:
XP_041079869
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Position
22:complement(5200906..5210972)
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AA seq
452 aa
AA seq
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MAFLITFFYLACVVYVLGEQQSEVSVYSENITRILDRLLDGYDNRLRPGFGGPVTEVKTD
IYVTSFGPVSDVEMEYTMDVFFRQTWVDERLKFDGSIEILRINNIMVSKIWTPDTFFRNG
KKSIAHNMTTPNKLFRIMKNGTVLYTMRLTINAECPMRLMNFPMDGHACPLKFGSYAYPR
SEIIYTWKKGPMHSVEVPQESSSLLQYDLIGQTVTSEILKSNTGEYIVMTVYFHLQRKMG
YFMIQAYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYAT
AMDWFIAVCFAFVFSALIEFAAVNYFTNLETQKAMTRKTRAAALEAETQAVDGEIVLQQS
DSNFNVKKRINCVVSHGEPLEEKDVLYALPQPQFLQQGSAIPSNPNTITGTSKIDKYARI
FFPLSFGAFNLVYWVVYLSKDTMEMDFHTSHS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggctttcctgatcactttcttttacttggcttgtgtagtctatgtcttgggagaacag
caaagtgaagtgagtgtctattccgaaaacatcacacgtattttagacaggctattggac
ggatatgacaatagattacgacctggatttggaggtcctgttacagaagtcaaaactgac
atctatgttaccagttttggtcctgtttctgatgttgaaatggaatacaccatggatgtg
ttcttccgacaaacatgggttgatgagagattgaaatttgacgggtccattgaaatactg
aggattaacaacattatggttagtaagatatggacacctgacaccttcttcagaaatggc
aagaaatcaattgcacacaacatgacgactccaaacaagctcttcagaatcatgaagaat
gggacagtactctatacaatgagacttaccatcaatgcagagtgccccatgagactaatg
aacttcccaatggatgggcatgcatgtcctttgaagtttggtagctatgcctatccaaga
agtgaaataatttacacatggaagaaagggccaatgcattctgttgaagtaccacaagaa
tcatcaagtttgcttcagtatgatctcataggacagacagttacaagtgaaatactaaaa
tccaacactggtgaatacatagttatgacagtttacttccacctgcaaaggaagatgggc
tacttcatgattcaggcatacattccgtgcataatgacagtgatactttctcaggtgtct
ttctggatcaataaggagtcagttcctgctagaactgtatttggcatcacaactgtactg
actatgacaacgctcagtatcagtgcccgacactccttgccaaaagtgtcctacgccact
gccatggactggtttatcgccgtgtgttttgccttcgtcttctctgcactcattgagttt
gctgctgtcaactatttcaccaatcttgagactcagaaggcgatgacaaggaagacaaga
gcagcagcactagaggcagagactcaagcagtggacggcgagatcgtcttgcagcaatca
gactccaatttcaacgtaaagaagagaataaactgtgtggtttcccatggtgaaccactt
gaagaaaaggatgtactgtatgctttgccacaaccacagtttcttcagcagggatctgcc
ataccttctaacccgaatactattactggaactagcaagatagacaagtatgccagaatt
tttttcccattatcgtttggtgcattcaacctggtgtactgggtcgtgtatctgtctaag
gacacaatggagatggacttccacacaagtcattcttga
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