KEGG   Polyodon spathula (Mississippi paddlefish): 121297574
Entry
121297574         CDS       T07273                                 
Name
(RefSeq) la-related protein 1-like isoform X1
  KO
K18757  la-related protein 1
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pspa03019]
    121297574
Messenger RNA biogenesis [BR:pspa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121297574
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 121297574
NCBI-ProteinID: XP_041079888
LinkDB
Position
22:complement(199206..221838)
AA seq 1071 aa
MATQVETVLPSNNPLMQQEGPLHTSNVTREGGCVGKEGKQPAGGAGSDAKESGEHGRYAG
NSEQSKGQVNEGSDDPEQRTVEQESSRLKEMETPGGEGGEKGSKKEFTEAPLPKVNPWTK
KMNSVTVISVNGQAHPDQPAPAKVVKAGNPRPRKGSKVSDFGDAMSWPTPGEMVNKEVQA
PVGKIQPPKKTLVKEKRDSEESKENQKTRSDDSGEEKNGDEDSQKYGSRKKGNKHRWVPL
PIEVKSEGPKERSASRNNTRQNEHYRLPPNSRNDLRDWHSANKHERDWREDHDEVSSVKS
EGAPFRGGYRGRGRGRGRGRGRGRGGSRGHFDYQYGYKNYDGKEGGSGQKFNSTVTYYYD
NTSSSEMYSVDQELLKDYIKRQIEYYFSLDNLERDFFLRRKMDSEGFIPIPLIAGFHRMQ
ALTTDINLIVLALKDSKEVEIIDLKIRRREDPERWPLPGLSAPDNTQTDFSQLINCPEFV
PRQADSQTESAPGSPRSLTPMQPKHEDVSNLKTMPKGLSASLPDLDSDTWIEVKKRPRPS
PSRPKMPGMMLCLFKQKLEESRSLVPVQQLAGPDEPEELDFMFDEEMQQMDGRRNNFTDW
SDEDSDCEIDDHDVNKILIVTQTPPSLRKHPGGDRTGNHTSRSKLSTELVKVINDGLYYY
EQDLWDESYEPEYATIKQEVENFKKVHLISREQFDCLTPEPPVDLNQEVPPGPPPPQQIP
TDALANKLFGAPEPSTIARSLPTTVPESPNYRNARTPRTPHTPRLKDPTQTPRFYPVVKE
GRPVDAKTPLKRKTRHSSNPPMECHVGWVMDSREHRARSRTASVSSNASPSEGTPANLGC
TPQSLPKFQHPSHELLKDNGFTQHVYHKYRRRCVNERKRLGIGQSQEMNTLFRFWSFFLR
DHFNRKMYEEFRQLVVEDGKEGYRYGLECLFRYYSYGLERKFRPDIFKDFQEETIKDYES
GQLYGLEKFWAFLKYSKTKTLEIDPKLQEYLSKFKRLEDFRVDPPMNEDGGRRRHSSSGE
GRRRNPSGQLGYSQAQASQGSSRDDAKNLNQKPAAAAASLAPASEPQSQEK
NT seq 3216 nt   +upstreamnt  +downstreamnt
atggccactcaggtggagacagtccttcccagcaacaaccctttaatgcaacaagaaggg
cccttgcatacaagcaacgtgacacgcgaggggggctgtgtgggaaaggaggggaagcag
ccggccggaggcgcggggagcgacgcgaaggagtccggcgagcacggccgatatgcgggt
aatagcgagcaaagcaaggggcaggtgaacgaggggagcgacgatccagagcagagaacc
gtggagcaagaatcgagccggctcaaagagatggagaccccaggaggagagggaggggag
aagggcagcaaaaaggagtttaccgaggccccccttcccaaggtgaacccgtggactaag
aaaatgaattcggtgaccgtgatcagtgtgaatggacaagcgcatcctgatcagccagct
ccagccaaggtggtgaaggctggtaacccaagaccaaggaaaggcagtaaggtcagtgat
tttggtgatgcaatgagctggccgaccccaggggaaatggtgaataaggaagtgcaggct
cctgttggaaagatccagcctcctaagaagactctggtgaaggagaagcgagacagcgag
gagagcaaggagaaccagaagaccagatctgacgattccggggaggagaagaacggggac
gaggactcacagaaatacgggtccaggaagaaaggtaacaagcatagatgggttcctctt
ccaatagaagtgaaatcagaaggtcccaaagagaggtctgcctccagaaacaacacccgc
caaaacgaacactacagactccccccaaacagcaggaacgacttgagggactggcacagt
gccaacaagcacgagcgagactggcgggaggatcacgacgaggtgtcgagtgtgaagagc
gagggagcccccttccgaggaggctacagaggccgggggcgtggccgagggagagggagg
ggccgaggcagggggggcagcagaggtcattttgactaccagtacggctacaagaattat
gatggtaaagaaggaggttccggacagaagttcaacagcacggtgacctactactacgac
aacaccagcagctcggagatgtactctgtggatcaggagctgctcaaggattatatcaag
agacagattgaatactacttcagcctggataacctagagagggatttcttcctgcggagg
aagatggattcggaaggtttcatcccaatcccgctgatcgctggcttccacagaatgcag
gcactgacgaccgatatcaacctcatagtgctggccctgaaggacagtaaagaggtggag
atcattgacctgaagatccgcaggagggaggacccagagcggtggcctctgcctggcctc
tccgcccctgataacacccagactgacttctcccagctcatcaactgccctgagtttgtg
cccagacaggccgacagtcagacagagtcggctccaggctctcccagatccttgactccc
atgcagcccaagcatgaagatgtgagtaacctgaagaccatgcccaaggggctgtctgct
agcctgcctgacctcgactccgacacctggattgaagtgaagaagaggcccaggccttca
ccctccagacccaagatgccaggaatgatgttatgtttgtttaaacagaagctggaggag
agtcgctctctggtcccggtgcagcagctggcaggtccggatgagcccgaggagctggac
ttcatgttcgacgaggagatgcagcagatggacggccgcaggaacaacttcacagactgg
tccgacgaagactcggactgcgagattgacgaccacgacgtcaacaagatcctgatcgtc
acgcagacccccccctccctgcgcaagcaccccgggggagaccgcaccggcaaccacacc
tcccgctccaagctctccaccgagctggtgaaggtcatcaacgatgggctctactactac
gagcaggacctctgggatgagtcttacgagccggagtacgcaaccatcaagcaagaagtg
gagaacttcaagaaggtgcatctgatcagcagggagcagtttgactgtctgacccccgag
cctcccgtggatctgaaccaagaagtgccgcccggcccacccccacctcagcagatccct
acagatgctttagccaataaactgtttggtgcccccgagccctctacaattgcccgatcg
ttaccgacaaccgtgcccgagtctccgaactaccgcaacgccaggacgccgcgcaccccc
cacaccccccggttaaaggaccccacgcagacaccccgcttctaccccgtggtgaaggaa
ggccggcctgtcgatgccaagaccccactcaagaggaagactcggcacagctccaacccc
cctatggagtgccatgtgggctgggtgatggactccagagagcacagggcaaggtccagg
acggcctccgtcagctcgaacgccagcccttctgaaggcacgcctgcaaacctgggctgc
accccccagtctcttcccaagttccagcatccctctcacgagctactcaaggacaacggc
ttcacacaacacgtgtaccacaagtaccgccggcgctgtgtcaacgaacgaaagcggctg
ggaatcggccagtcccaggagatgaacacgctgttccgtttctggtccttcttcctgcgg
gatcacttcaacaggaagatgtacgaggagttcagacagctggtggtggaggatgggaaa
gagggatacaggtatgggttggagtgccttttcaggtattacagctacggactggaaagg
aaattcaggcctgatatatttaaagattttcaggaggaaaccatcaaggattatgaatct
ggacaactgtatggacttgaaaagttttgggcgttcctgaaatactcgaaaaccaagacc
ctggaaattgaccccaagctgcaggaatacttgagcaaattcaagcgcctcgaggatttc
cgggtggatcctccaatgaacgaggatggaggtcgtaggagacactcgtccagcggagag
ggaaggagacgtaacccgtcgggccagctggggtacagccaggcccaggcttcgcaaggc
tcctccagagatgatgccaaaaatctgaaccagaaacctgctgctgctgctgcttccctc
gcacccgcctcggagccccaatcccaggagaagtga

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